Cluster: MGYG000002707_CGC2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: MGYG000002707
- CGC Family ID: CGCFAM_00004
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002707_1 | MGYG000002707_1_82 | 86117 | 88108 | + | CBM48 | GH13_9 |
| pfam | MGYG000002707_1 | MGYG000002707_1_83 | 88139 | 89347 | + | NTP_transferase | Hexapep_GlmU |
| pfam | MGYG000002707_1 | MGYG000002707_1_84 | 89344 | 90459 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | MGYG000002707_1 | MGYG000002707_1_85 | 90537 | 91973 | + | GT5 |
| CAZyme | MGYG000002707_1 | MGYG000002707_1_86 | 92099 | 94525 | + | GT35 |
| NULL(UNKNOWN) | MGYG000002707_1 | MGYG000002707_1_87 | 94583 | 95890 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000002707_1 | MGYG000002707_1_88 | 95890 | 96357 | - | Sigma70_r2 | Sigma70_r4_2 |
| TC | MGYG000002707_1 | MGYG000002707_1_89 | 96502 | 97980 | - | 2.A.114.1.4 |
Gene ID: MGYG000002707_1_82
Type: CAZyme
Location: 86117 - 88108 (+)
Type: CAZyme
Location: 86117 - 88108 (+)
Gene ID: MGYG000002707_1_83
Type: pfam
Location: 88139 - 89347 (+)
Type: pfam
Location: 88139 - 89347 (+)
Gene ID: MGYG000002707_1_84
Type: pfam
Location: 89344 - 90459 (+)
Type: pfam
Location: 89344 - 90459 (+)
Gene ID: MGYG000002707_1_85
Type: CAZyme
Location: 90537 - 91973 (+)
Type: CAZyme
Location: 90537 - 91973 (+)
Gene ID: MGYG000002707_1_86
Type: CAZyme
Location: 92099 - 94525 (+)
Type: CAZyme
Location: 92099 - 94525 (+)
Gene ID: MGYG000002707_1_87
Type:
Location: 94583 - 95890 (-)
Type:
Location: 94583 - 95890 (-)
Gene ID: MGYG000002707_1_88
Type: STP
Location: 95890 - 96357 (-)
Type: STP
Location: 95890 - 96357 (-)
Gene ID: MGYG000002707_1_89
Type: TC
Location: 96502 - 97980 (-)
Type: TC
Location: 96502 - 97980 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter_A
Species
Lawsonibacter_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.