Cluster: MGYG000002707_CGC12
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000002707
- CGC Family ID: CGCFAM_01648
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002707_11 | MGYG000002707_11_39 | 46267 | 48438 | - | CBM32 | GH5_54 |
| CAZyme | MGYG000002707_11 | MGYG000002707_11_40 | 48469 | 51501 | - | GH161 |
| CAZyme | MGYG000002707_11 | MGYG000002707_11_41 | 51503 | 52846 | - | GH30_1 |
| CAZyme | MGYG000002707_11 | MGYG000002707_11_42 | 52843 | 54345 | - | GH5_46 |
| TC | MGYG000002707_11 | MGYG000002707_11_43 | 54350 | 55147 | - | 3.A.1.1.45 |
| TC | MGYG000002707_11 | MGYG000002707_11_44 | 55177 | 56055 | - | 3.A.1.1.28 |
| STP | MGYG000002707_11 | MGYG000002707_11_45 | 56120 | 57412 | - | SBP_bac_1 |
| TF | MGYG000002707_11 | MGYG000002707_11_46 | 57493 | 58587 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000002707_11 | MGYG000002707_11_47 | 58562 | 60376 | - | 8.A.59.2.1 |
| NULL(UNKNOWN) | MGYG000002707_11 | MGYG000002707_11_48 | 60855 | 61073 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000002707_11 | MGYG000002707_11_49 | 61063 | 61308 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002707_11 | MGYG000002707_11_50 | 61375 | 62394 | - | GH179 |
| pfam | MGYG000002707_11 | MGYG000002707_11_51 | 62434 | 63318 | - | AP_endonuc_2 |
| TC | MGYG000002707_11 | MGYG000002707_11_52 | 63355 | 64320 | - | 3.A.1.2.13 |
| TC | MGYG000002707_11 | MGYG000002707_11_53 | 64307 | 65278 | - | 3.A.1.2.16 |
| TC | MGYG000002707_11 | MGYG000002707_11_54 | 65275 | 66792 | - | 3.A.1.2.1 |
| TC | MGYG000002707_11 | MGYG000002707_11_55 | 66895 | 67989 | - | 3.A.1.2.11 |
Gene ID: MGYG000002707_11_39
Type: CAZyme
Location: 46267 - 48438 (-)
Type: CAZyme
Location: 46267 - 48438 (-)
Gene ID: MGYG000002707_11_40
Type: CAZyme
Location: 48469 - 51501 (-)
Type: CAZyme
Location: 48469 - 51501 (-)
Gene ID: MGYG000002707_11_41
Type: CAZyme
Location: 51503 - 52846 (-)
Type: CAZyme
Location: 51503 - 52846 (-)
Gene ID: MGYG000002707_11_42
Type: CAZyme
Location: 52843 - 54345 (-)
Type: CAZyme
Location: 52843 - 54345 (-)
Gene ID: MGYG000002707_11_43
Type: TC
Location: 54350 - 55147 (-)
Type: TC
Location: 54350 - 55147 (-)
Gene ID: MGYG000002707_11_44
Type: TC
Location: 55177 - 56055 (-)
Type: TC
Location: 55177 - 56055 (-)
Gene ID: MGYG000002707_11_45
Type: STP
Location: 56120 - 57412 (-)
Type: STP
Location: 56120 - 57412 (-)
Gene ID: MGYG000002707_11_46
Type: TF
Location: 57493 - 58587 (-)
Type: TF
Location: 57493 - 58587 (-)
Gene ID: MGYG000002707_11_47
Type: TC
Location: 58562 - 60376 (-)
Type: TC
Location: 58562 - 60376 (-)
Gene ID: MGYG000002707_11_48
Type:
Location: 60855 - 61073 (+)
Type:
Location: 60855 - 61073 (+)
Gene ID: MGYG000002707_11_49
Type:
Location: 61063 - 61308 (+)
Type:
Location: 61063 - 61308 (+)
Gene ID: MGYG000002707_11_50
Type: CAZyme
Location: 61375 - 62394 (-)
Type: CAZyme
Location: 61375 - 62394 (-)
Gene ID: MGYG000002707_11_51
Type: pfam
Location: 62434 - 63318 (-)
Type: pfam
Location: 62434 - 63318 (-)
Gene ID: MGYG000002707_11_52
Type: TC
Location: 63355 - 64320 (-)
Type: TC
Location: 63355 - 64320 (-)
Gene ID: MGYG000002707_11_53
Type: TC
Location: 64307 - 65278 (-)
Type: TC
Location: 64307 - 65278 (-)
Gene ID: MGYG000002707_11_54
Type: TC
Location: 65275 - 66792 (-)
Type: TC
Location: 65275 - 66792 (-)
Gene ID: MGYG000002707_11_55
Type: TC
Location: 66895 - 67989 (-)
Type: TC
Location: 66895 - 67989 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter_A
Species
Lawsonibacter_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.