Cluster: MGYG000002707_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002707
- CGC Family ID: CGCFAM_04081
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002707_11 | MGYG000002707_11_29 | 31574 | 32842 | - | GH3 |
| pfam | MGYG000002707_11 | MGYG000002707_11_30 | 32839 | 34881 | - | RNB | OB_RNB | CSD2 |
| pfam | MGYG000002707_11 | MGYG000002707_11_31 | 35006 | 35242 | - | SecG |
| TC | MGYG000002707_11 | MGYG000002707_11_32 | 35411 | 37405 | - | 3.A.1.134.12 |
| TC | MGYG000002707_11 | MGYG000002707_11_33 | 37395 | 38162 | - | 3.A.1.134.12 |
| pfam | MGYG000002707_11 | MGYG000002707_11_34 | 38334 | 38708 | + | Ribonuc_L-PSP |
| TC | MGYG000002707_11 | MGYG000002707_11_35 | 38948 | 40273 | + | 2.A.40.2.1 |
Gene ID: MGYG000002707_11_29
Type: CAZyme
Location: 31574 - 32842 (-)
Type: CAZyme
Location: 31574 - 32842 (-)
Gene ID: MGYG000002707_11_30
Type: pfam
Location: 32839 - 34881 (-)
Type: pfam
Location: 32839 - 34881 (-)
Gene ID: MGYG000002707_11_31
Type: pfam
Location: 35006 - 35242 (-)
Type: pfam
Location: 35006 - 35242 (-)
Gene ID: MGYG000002707_11_32
Type: TC
Location: 35411 - 37405 (-)
Type: TC
Location: 35411 - 37405 (-)
Gene ID: MGYG000002707_11_33
Type: TC
Location: 37395 - 38162 (-)
Type: TC
Location: 37395 - 38162 (-)
Gene ID: MGYG000002707_11_34
Type: pfam
Location: 38334 - 38708 (+)
Type: pfam
Location: 38334 - 38708 (+)
Gene ID: MGYG000002707_11_35
Type: TC
Location: 38948 - 40273 (+)
Type: TC
Location: 38948 - 40273 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter_A
Species
Lawsonibacter_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.