Cluster: MGYG000002690_CGC8
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002690
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002690_18 | MGYG000002690_18_17 | 18071 | 20398 | - | 9.A.8.1.6 |
| TC | MGYG000002690_18 | MGYG000002690_18_18 | 20522 | 20743 | - | 9.A.8.1.6 |
| STP | MGYG000002690_18 | MGYG000002690_18_19 | 20783 | 21025 | - | FeoA |
| STP | MGYG000002690_18 | MGYG000002690_18_20 | 21214 | 21462 | - | PTS-HPr |
| TC | MGYG000002690_18 | MGYG000002690_18_21 | 21885 | 23009 | - | 2.A.3.7.4 |
| TC | MGYG000002690_18 | MGYG000002690_18_22 | 23027 | 23347 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000002690_18 | MGYG000002690_18_23 | 23501 | 23956 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002690_18 | MGYG000002690_18_24 | 23960 | 26968 | - | GH2 |
Gene ID: MGYG000002690_18_17
Type: TC
Location: 18071 - 20398 (-)
Type: TC
Location: 18071 - 20398 (-)
Gene ID: MGYG000002690_18_18
Type: TC
Location: 20522 - 20743 (-)
Type: TC
Location: 20522 - 20743 (-)
Gene ID: MGYG000002690_18_19
Type: STP
Location: 20783 - 21025 (-)
Type: STP
Location: 20783 - 21025 (-)
Gene ID: MGYG000002690_18_20
Type: STP
Location: 21214 - 21462 (-)
Type: STP
Location: 21214 - 21462 (-)
Gene ID: MGYG000002690_18_21
Type: TC
Location: 21885 - 23009 (-)
Type: TC
Location: 21885 - 23009 (-)
Gene ID: MGYG000002690_18_22
Type: TC
Location: 23027 - 23347 (-)
Type: TC
Location: 23027 - 23347 (-)
Gene ID: MGYG000002690_18_23
Type:
Location: 23501 - 23956 (-)
Type:
Location: 23501 - 23956 (-)
Gene ID: MGYG000002690_18_24
Type: CAZyme
Location: 23960 - 26968 (-)
Type: CAZyme
Location: 23960 - 26968 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902478365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.