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Cluster: MGYG000002690_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002690_40 MGYG000002690_40_1 54 707 + 4.A.3.1.1
CAZyme MGYG000002690_40 MGYG000002690_40_2 774 2213 + GH1
TF MGYG000002690_40 MGYG000002690_40_3 2490 3527 - LacI
CAZyme MGYG000002690_40 MGYG000002690_40_4 3869 5311 + GH1
TC MGYG000002690_40 MGYG000002690_40_5 5488 7248 + 4.A.3.1.1
TF MGYG000002690_40 MGYG000002690_40_6 7586 8596 - LacI
TC MGYG000002690_40 MGYG000002690_40_7 8872 9345 + 4.A.3.1.1
TC MGYG000002690_40 MGYG000002690_40_8 9493 10650 + 4.A.3.1.1
CAZyme MGYG000002690_40 MGYG000002690_40_9 10727 12148 + GH1
Gene ID: MGYG000002690_40_1
Type: TC
Location: 54 - 707 (+)
Gene ID: MGYG000002690_40_2
Type: CAZyme
Location: 774 - 2213 (+)
Gene ID: MGYG000002690_40_3
Type: TF
Location: 2490 - 3527 (-)
Gene ID: MGYG000002690_40_4
Type: CAZyme
Location: 3869 - 5311 (+)
Gene ID: MGYG000002690_40_5
Type: TC
Location: 5488 - 7248 (+)
Gene ID: MGYG000002690_40_6
Type: TF
Location: 7586 - 8596 (-)
Gene ID: MGYG000002690_40_7
Type: TC
Location: 8872 - 9345 (+)
Gene ID: MGYG000002690_40_8
Type: TC
Location: 9493 - 10650 (+)
Gene ID: MGYG000002690_40_9
Type: CAZyme
Location: 10727 - 12148 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002690_40_3 vegetarian > omnivore 1.02511 0.02677

🧭 Explore Read Mapping of CGC

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