Cluster: MGYG000002634_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002634
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002634_8 | MGYG000002634_8_121 | 106219 | 106605 | - | 1.A.22.1.1 |
| TC | MGYG000002634_8 | MGYG000002634_8_122 | 106684 | 108060 | - | 2.A.38.1.1 |
| CAZyme | MGYG000002634_8 | MGYG000002634_8_123 | 108057 | 108872 | - | GT2 |
Gene ID: MGYG000002634_8_121
Type: TC
Location: 106219 - 106605 (-)
Type: TC
Location: 106219 - 106605 (-)
Gene ID: MGYG000002634_8_122
Type: TC
Location: 106684 - 108060 (-)
Type: TC
Location: 106684 - 108060 (-)
Gene ID: MGYG000002634_8_123
Type: CAZyme
Location: 108057 - 108872 (-)
Type: CAZyme
Location: 108057 - 108872 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002634_8_121 | vegan > omnivore | 1.80778 | 0.00918 |
| MGYG000002634_8_121 | vegetarian > omnivore | 3.14557 | 0.01788 |
| MGYG000002634_8_122 | vegetarian > omnivore | 1.27743 | 0.00878 |
| MGYG000002634_8_123 | vegan > omnivore | 1.65823 | 0.00918 |
| MGYG000002634_8_123 | vegetarian > omnivore | 1.05637 | 0.01788 |