Cluster: MGYG000002634_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002634
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002634_8 | MGYG000002634_8_33 | 37695 | 38774 | - | 1.B.1.3.3 |
| CAZyme | MGYG000002634_8 | MGYG000002634_8_34 | 38940 | 39893 | - | GT9 |
| TC | MGYG000002634_8 | MGYG000002634_8_35 | 39890 | 40795 | - | 2.A.7.3.58 |
| CAZyme | MGYG000002634_8 | MGYG000002634_8_36 | 40792 | 41835 | - | GT9 |
Gene ID: MGYG000002634_8_33
Type: TC
Location: 37695 - 38774 (-)
Type: TC
Location: 37695 - 38774 (-)
Gene ID: MGYG000002634_8_34
Type: CAZyme
Location: 38940 - 39893 (-)
Type: CAZyme
Location: 38940 - 39893 (-)
Gene ID: MGYG000002634_8_35
Type: TC
Location: 39890 - 40795 (-)
Type: TC
Location: 39890 - 40795 (-)
Gene ID: MGYG000002634_8_36
Type: CAZyme
Location: 40792 - 41835 (-)
Type: CAZyme
Location: 40792 - 41835 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002634_8_33 | vegetarian > omnivore | 1.19735 | 0.01788 |
| MGYG000002634_8_34 | vegan > omnivore | 1.31755 | 0.00918 |
| MGYG000002634_8_34 | vegetarian > omnivore | 1.68019 | 0.01788 |