Cluster: MGYG000002634_CGC17
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002634
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002634_7 | MGYG000002634_7_19 | 19983 | 20756 | - | 3.A.1.14.19 |
| TC | MGYG000002634_7 | MGYG000002634_7_20 | 20756 | 21805 | - | 3.A.1.14.5 |
| STP | MGYG000002634_7 | MGYG000002634_7_21 | 21821 | 22936 | - | Peripla_BP_2 |
| pfam | MGYG000002634_7 | MGYG000002634_7_22 | 23034 | 24173 | - | CCP_MauG |
| CAZyme | MGYG000002634_7 | MGYG000002634_7_23 | 24253 | 25371 | - | GH103 |
| CAZyme | MGYG000002634_7 | MGYG000002634_7_24 | 25405 | 26208 | - | GT2 |
| CAZyme | MGYG000002634_7 | MGYG000002634_7_25 | 26231 | 27112 | - | GT2 |
| NULL(UNKNOWN) | MGYG000002634_7 | MGYG000002634_7_26 | 27105 | 28304 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002634_7 | MGYG000002634_7_27 | 28312 | 29082 | - | GT25 |
Gene ID: MGYG000002634_7_19
Type: TC
Location: 19983 - 20756 (-)
Type: TC
Location: 19983 - 20756 (-)
Gene ID: MGYG000002634_7_20
Type: TC
Location: 20756 - 21805 (-)
Type: TC
Location: 20756 - 21805 (-)
Gene ID: MGYG000002634_7_21
Type: STP
Location: 21821 - 22936 (-)
Type: STP
Location: 21821 - 22936 (-)
Gene ID: MGYG000002634_7_22
Type: pfam
Location: 23034 - 24173 (-)
Type: pfam
Location: 23034 - 24173 (-)
Gene ID: MGYG000002634_7_23
Type: CAZyme
Location: 24253 - 25371 (-)
Type: CAZyme
Location: 24253 - 25371 (-)
Gene ID: MGYG000002634_7_24
Type: CAZyme
Location: 25405 - 26208 (-)
Type: CAZyme
Location: 25405 - 26208 (-)
Gene ID: MGYG000002634_7_25
Type: CAZyme
Location: 26231 - 27112 (-)
Type: CAZyme
Location: 26231 - 27112 (-)
Gene ID: MGYG000002634_7_26
Type:
Location: 27105 - 28304 (-)
Type:
Location: 27105 - 28304 (-)
Gene ID: MGYG000002634_7_27
Type: CAZyme
Location: 28312 - 29082 (-)
Type: CAZyme
Location: 28312 - 29082 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002634_7_21 | vegan > omnivore | 1.79368 | 0.00918 |
| MGYG000002634_7_21 | vegetarian > omnivore | 1.16311 | 0.01788 |
| MGYG000002634_7_25 | vegetarian > omnivore | 2.12665 | 0.01788 |