Cluster: MGYG000002634_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002634
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002634_7 | MGYG000002634_7_7 | 7348 | 9747 | + | GT51 |
| TC | MGYG000002634_7 | MGYG000002634_7_8 | 9967 | 11871 | + | 2.A.108.2.10 |
| TC | MGYG000002634_7 | MGYG000002634_7_9 | 11900 | 12421 | + | 2.A.108.2.10 |
| pfam | MGYG000002634_7 | MGYG000002634_7_10 | 12537 | 13931 | + | YHS | FtrD-like |
| TC | MGYG000002634_7 | MGYG000002634_7_11 | 13931 | 15271 | + | 3.A.1.122.8 |
| pfam | MGYG000002634_7 | MGYG000002634_7_12 | 15258 | 16391 | + | FtsX | MacB_PCD |
| TC | MGYG000002634_7 | MGYG000002634_7_13 | 16393 | 17064 | + | 3.A.1.122.8 |
Gene ID: MGYG000002634_7_7
Type: CAZyme
Location: 7348 - 9747 (+)
Type: CAZyme
Location: 7348 - 9747 (+)
Gene ID: MGYG000002634_7_8
Type: TC
Location: 9967 - 11871 (+)
Type: TC
Location: 9967 - 11871 (+)
Gene ID: MGYG000002634_7_9
Type: TC
Location: 11900 - 12421 (+)
Type: TC
Location: 11900 - 12421 (+)
Gene ID: MGYG000002634_7_10
Type: pfam
Location: 12537 - 13931 (+)
Type: pfam
Location: 12537 - 13931 (+)
Gene ID: MGYG000002634_7_11
Type: TC
Location: 13931 - 15271 (+)
Type: TC
Location: 13931 - 15271 (+)
Gene ID: MGYG000002634_7_12
Type: pfam
Location: 15258 - 16391 (+)
Type: pfam
Location: 15258 - 16391 (+)
Gene ID: MGYG000002634_7_13
Type: TC
Location: 16393 - 17064 (+)
Type: TC
Location: 16393 - 17064 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002634_7_10 | vegetarian > vegan | 1.72992 | 0.02923 |