Cluster: MGYG000002634_CGC14
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002634
- CGC Family ID: CGCFAM_00701
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002634_6 | MGYG000002634_6_6 | 4199 | 5584 | - | 2.A.47.5.2 |
| TC | MGYG000002634_6 | MGYG000002634_6_7 | 5740 | 6966 | - | 2.A.1.12.1 |
| TF | MGYG000002634_6 | MGYG000002634_6_8 | 7140 | 7850 | + | GntR |
| pfam | MGYG000002634_6 | MGYG000002634_6_9 | 7840 | 8913 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | F420_oxidored | GFO_IDH_MocA_C3 |
| CAZyme | MGYG000002634_6 | MGYG000002634_6_10 | 8924 | 10030 | + | GH177 |
| pfam | MGYG000002634_6 | MGYG000002634_6_11 | 10106 | 10738 | - | PNPOx_N | PNP_phzG_C | Pyridox_oxase_2 |
| TC | MGYG000002634_6 | MGYG000002634_6_12 | 10805 | 12451 | - | 3.A.1.5.27 |
| TC | MGYG000002634_6 | MGYG000002634_6_13 | 12585 | 13994 | - | 2.A.1.3.51 |
Gene ID: MGYG000002634_6_6
Type: TC
Location: 4199 - 5584 (-)
Type: TC
Location: 4199 - 5584 (-)
Gene ID: MGYG000002634_6_7
Type: TC
Location: 5740 - 6966 (-)
Type: TC
Location: 5740 - 6966 (-)
Gene ID: MGYG000002634_6_8
Type: TF
Location: 7140 - 7850 (+)
Type: TF
Location: 7140 - 7850 (+)
Gene ID: MGYG000002634_6_9
Type: pfam
Location: 7840 - 8913 (+)
Type: pfam
Location: 7840 - 8913 (+)
Gene ID: MGYG000002634_6_10
Type: CAZyme
Location: 8924 - 10030 (+)
Type: CAZyme
Location: 8924 - 10030 (+)
Gene ID: MGYG000002634_6_11
Type: pfam
Location: 10106 - 10738 (-)
Type: pfam
Location: 10106 - 10738 (-)
Gene ID: MGYG000002634_6_12
Type: TC
Location: 10805 - 12451 (-)
Type: TC
Location: 10805 - 12451 (-)
Gene ID: MGYG000002634_6_13
Type: TC
Location: 12585 - 13994 (-)
Type: TC
Location: 12585 - 13994 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002634_6_11 | vegetarian > omnivore | 1.08086 | 0.01788 |
| MGYG000002634_6_12 | vegan > omnivore | 1.06585 | 0.00918 |