Cluster: MGYG000002634_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002634
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002634_5 | MGYG000002634_5_160 | 160665 | 161966 | - | 2.A.26.1.1 |
| TC | MGYG000002634_5 | MGYG000002634_5_161 | 162176 | 163363 | + | 2.A.33.1.2 |
| CAZyme | MGYG000002634_5 | MGYG000002634_5_162 | 163372 | 164904 | + | GT2 |
| pfam | MGYG000002634_5 | MGYG000002634_5_163 | 164996 | 166135 | - | DUF2827 |
| TC | MGYG000002634_5 | MGYG000002634_5_164 | 166267 | 167442 | - | 1.B.40.1.5 |
Gene ID: MGYG000002634_5_160
Type: TC
Location: 160665 - 161966 (-)
Type: TC
Location: 160665 - 161966 (-)
Gene ID: MGYG000002634_5_161
Type: TC
Location: 162176 - 163363 (+)
Type: TC
Location: 162176 - 163363 (+)
Gene ID: MGYG000002634_5_162
Type: CAZyme
Location: 163372 - 164904 (+)
Type: CAZyme
Location: 163372 - 164904 (+)
Gene ID: MGYG000002634_5_163
Type: pfam
Location: 164996 - 166135 (-)
Type: pfam
Location: 164996 - 166135 (-)
Gene ID: MGYG000002634_5_164
Type: TC
Location: 166267 - 167442 (-)
Type: TC
Location: 166267 - 167442 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002634_5_164 | vegetarian > omnivore | 1.16049 | 0.01788 |