Cluster: MGYG000002619_CGC27
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000002619
- CGC Family ID: CGCFAM_00009
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002619_9 | MGYG000002619_9_108 | 120000 | 121463 | - | GH1 |
| TC | MGYG000002619_9 | MGYG000002619_9_109 | 121476 | 123116 | - | 4.A.1.2.11 |
| pfam | MGYG000002619_9 | MGYG000002619_9_110 | 123201 | 124031 | - | PRD | PRD | CAT_RBD |
| pfam | MGYG000002619_9 | MGYG000002619_9_111 | 124348 | 125427 | - | PFK |
| CAZyme | MGYG000002619_9 | MGYG000002619_9_112 | 126515 | 127618 | + | GT4 |
| CAZyme | MGYG000002619_9 | MGYG000002619_9_113 | 127587 | 128528 | + | GT2 |
| CAZyme | MGYG000002619_9 | MGYG000002619_9_114 | 128525 | 129352 | + | GT2 |
| TC | MGYG000002619_9 | MGYG000002619_9_115 | 129407 | 130192 | + | 3.A.1.104.1 |
| TC | MGYG000002619_9 | MGYG000002619_9_116 | 130206 | 131528 | + | 3.A.1.103.6 |
| pfam | MGYG000002619_9 | MGYG000002619_9_117 | 131525 | 132931 | + | MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | MGYG000002619_9 | MGYG000002619_9_118 | 132958 | 133806 | + | GT2 |
Gene ID: MGYG000002619_9_108
Type: CAZyme
Location: 120000 - 121463 (-)
Type: CAZyme
Location: 120000 - 121463 (-)
Gene ID: MGYG000002619_9_109
Type: TC
Location: 121476 - 123116 (-)
Type: TC
Location: 121476 - 123116 (-)
Gene ID: MGYG000002619_9_110
Type: pfam
Location: 123201 - 124031 (-)
Type: pfam
Location: 123201 - 124031 (-)
Gene ID: MGYG000002619_9_111
Type: pfam
Location: 124348 - 125427 (-)
Type: pfam
Location: 124348 - 125427 (-)
Gene ID: MGYG000002619_9_112
Type: CAZyme
Location: 126515 - 127618 (+)
Type: CAZyme
Location: 126515 - 127618 (+)
Gene ID: MGYG000002619_9_113
Type: CAZyme
Location: 127587 - 128528 (+)
Type: CAZyme
Location: 127587 - 128528 (+)
Gene ID: MGYG000002619_9_114
Type: CAZyme
Location: 128525 - 129352 (+)
Type: CAZyme
Location: 128525 - 129352 (+)
Gene ID: MGYG000002619_9_115
Type: TC
Location: 129407 - 130192 (+)
Type: TC
Location: 129407 - 130192 (+)
Gene ID: MGYG000002619_9_116
Type: TC
Location: 130206 - 131528 (+)
Type: TC
Location: 130206 - 131528 (+)
Gene ID: MGYG000002619_9_117
Type: pfam
Location: 131525 - 132931 (+)
Type: pfam
Location: 131525 - 132931 (+)
Gene ID: MGYG000002619_9_118
Type: CAZyme
Location: 132958 - 133806 (+)
Type: CAZyme
Location: 132958 - 133806 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_J
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002619_9_110 | vegan > omnivore | 2.86505 | 0.01541 |
| MGYG000002619_9_110 | vegetarian > omnivore | 2.06569 | 0.00759 |
| MGYG000002619_9_112 | vegan > omnivore | 11.16553 | 0.00565 |
| MGYG000002619_9_113 | vegan > omnivore | 11.83837 | 0.00565 |
| MGYG000002619_9_113 | vegetarian > omnivore | 9.19947 | 0.04896 |