Cluster: MGYG000002619_CGC25
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002619
- CGC Family ID: CGCFAM_01009
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002619_9 | MGYG000002619_9_11 | 12609 | 13124 | - | 3.A.1.26.5 |
| CAZyme | MGYG000002619_9 | MGYG000002619_9_12 | 13933 | 16368 | - | GH94 |
| TF | MGYG000002619_9 | MGYG000002619_9_13 | 16896 | 17903 | + | LacI |
| NULL(UNKNOWN) | MGYG000002619_9 | MGYG000002619_9_14 | 17984 | 19429 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002619_9 | MGYG000002619_9_15 | 19528 | 20505 | + | 3.A.1.1.4 |
| TC | MGYG000002619_9 | MGYG000002619_9_16 | 20508 | 21374 | + | 3.A.1.1.48 |
| pfam | MGYG000002619_9 | MGYG000002619_9_17 | 21752 | 22162 | - | Pep_deformylase |
| TC | MGYG000002619_9 | MGYG000002619_9_18 | 22177 | 23457 | - | 2.A.26.1.1 |
| pfam | MGYG000002619_9 | MGYG000002619_9_19 | 23668 | 24438 | + | BPD_transp_1 |
| TC | MGYG000002619_9 | MGYG000002619_9_20 | 24432 | 25025 | + | 3.A.1.19.1 |
| pfam | MGYG000002619_9 | MGYG000002619_9_21 | 25032 | 26114 | - | Radical_SAM | HemN_C |
| TC | MGYG000002619_9 | MGYG000002619_9_22 | 26224 | 26928 | + | 1.A.14.2.2 |
Gene ID: MGYG000002619_9_11
Type: TC
Location: 12609 - 13124 (-)
Type: TC
Location: 12609 - 13124 (-)
Gene ID: MGYG000002619_9_12
Type: CAZyme
Location: 13933 - 16368 (-)
Type: CAZyme
Location: 13933 - 16368 (-)
Gene ID: MGYG000002619_9_13
Type: TF
Location: 16896 - 17903 (+)
Type: TF
Location: 16896 - 17903 (+)
Gene ID: MGYG000002619_9_14
Type:
Location: 17984 - 19429 (+)
Type:
Location: 17984 - 19429 (+)
Gene ID: MGYG000002619_9_15
Type: TC
Location: 19528 - 20505 (+)
Type: TC
Location: 19528 - 20505 (+)
Gene ID: MGYG000002619_9_16
Type: TC
Location: 20508 - 21374 (+)
Type: TC
Location: 20508 - 21374 (+)
Gene ID: MGYG000002619_9_17
Type: pfam
Location: 21752 - 22162 (-)
Type: pfam
Location: 21752 - 22162 (-)
Gene ID: MGYG000002619_9_18
Type: TC
Location: 22177 - 23457 (-)
Type: TC
Location: 22177 - 23457 (-)
Gene ID: MGYG000002619_9_19
Type: pfam
Location: 23668 - 24438 (+)
Type: pfam
Location: 23668 - 24438 (+)
Gene ID: MGYG000002619_9_20
Type: TC
Location: 24432 - 25025 (+)
Type: TC
Location: 24432 - 25025 (+)
Gene ID: MGYG000002619_9_21
Type: pfam
Location: 25032 - 26114 (-)
Type: pfam
Location: 25032 - 26114 (-)
Gene ID: MGYG000002619_9_22
Type: TC
Location: 26224 - 26928 (+)
Type: TC
Location: 26224 - 26928 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_J
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.