Cluster: MGYG000002619_CGC12
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002619
- CGC Family ID: CGCFAM_01424
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002619_5 | MGYG000002619_5_74 | 70877 | 72004 | - | CE9 |
| TC | MGYG000002619_5 | MGYG000002619_5_75 | 72207 | 73673 | - | 4.A.1.1.7 |
| pfam | MGYG000002619_5 | MGYG000002619_5_76 | 74024 | 74938 | + | TRM5-TYW2_MTfase | MTS | PrmA | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| pfam | MGYG000002619_5 | MGYG000002619_5_77 | 74970 | 75713 | + | Methyltrans_RNA | PUA_4 |
| TC | MGYG000002619_5 | MGYG000002619_5_78 | 76029 | 77660 | - | 8.A.7.1.5 |
| pfam | MGYG000002619_5 | MGYG000002619_5_79 | 77647 | 78828 | - | Patatin |
| pfam | MGYG000002619_5 | MGYG000002619_5_80 | 79008 | 79658 | + | Hydrolase | HAD | HAD_2 |
| CAZyme | MGYG000002619_5 | MGYG000002619_5_81 | 79751 | 80773 | + | GT2 |
| TF | MGYG000002619_5 | MGYG000002619_5_82 | 80904 | 81623 | - | LytTR |
| peptidase | MGYG000002619_5 | MGYG000002619_5_83 | 81916 | 83715 | - | M24.UPB |
| TC | MGYG000002619_5 | MGYG000002619_5_84 | 84497 | 85732 | + | 9.B.10.1.1 |
| pfam | MGYG000002619_5 | MGYG000002619_5_85 | 85813 | 86775 | + | cobW | DUF1980_C |
| NULL(UNKNOWN) | MGYG000002619_5 | MGYG000002619_5_86 | 86804 | 87262 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002619_5 | MGYG000002619_5_87 | 87337 | 88311 | - | 2.A.19.5.2 |
| NULL(UNKNOWN) | MGYG000002619_5 | MGYG000002619_5_88 | 88407 | 88754 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002619_5 | MGYG000002619_5_89 | 88770 | 90050 | - | 2.A.47.4.7 |
| TC | MGYG000002619_5 | MGYG000002619_5_90 | 90419 | 92302 | - | 3.A.3.6.10 |
Gene ID: MGYG000002619_5_74
Type: CAZyme
Location: 70877 - 72004 (-)
Type: CAZyme
Location: 70877 - 72004 (-)
Gene ID: MGYG000002619_5_75
Type: TC
Location: 72207 - 73673 (-)
Type: TC
Location: 72207 - 73673 (-)
Gene ID: MGYG000002619_5_76
Type: pfam
Location: 74024 - 74938 (+)
Type: pfam
Location: 74024 - 74938 (+)
Gene ID: MGYG000002619_5_77
Type: pfam
Location: 74970 - 75713 (+)
Type: pfam
Location: 74970 - 75713 (+)
Gene ID: MGYG000002619_5_78
Type: TC
Location: 76029 - 77660 (-)
Type: TC
Location: 76029 - 77660 (-)
Gene ID: MGYG000002619_5_79
Type: pfam
Location: 77647 - 78828 (-)
Type: pfam
Location: 77647 - 78828 (-)
Gene ID: MGYG000002619_5_80
Type: pfam
Location: 79008 - 79658 (+)
Type: pfam
Location: 79008 - 79658 (+)
Gene ID: MGYG000002619_5_81
Type: CAZyme
Location: 79751 - 80773 (+)
Type: CAZyme
Location: 79751 - 80773 (+)
Gene ID: MGYG000002619_5_82
Type: TF
Location: 80904 - 81623 (-)
Type: TF
Location: 80904 - 81623 (-)
Gene ID: MGYG000002619_5_83
Type: peptidase
Location: 81916 - 83715 (-)
Type: peptidase
Location: 81916 - 83715 (-)
Gene ID: MGYG000002619_5_84
Type: TC
Location: 84497 - 85732 (+)
Type: TC
Location: 84497 - 85732 (+)
Gene ID: MGYG000002619_5_85
Type: pfam
Location: 85813 - 86775 (+)
Type: pfam
Location: 85813 - 86775 (+)
Gene ID: MGYG000002619_5_86
Type:
Location: 86804 - 87262 (+)
Type:
Location: 86804 - 87262 (+)
Gene ID: MGYG000002619_5_87
Type: TC
Location: 87337 - 88311 (-)
Type: TC
Location: 87337 - 88311 (-)
Gene ID: MGYG000002619_5_88
Type:
Location: 88407 - 88754 (-)
Type:
Location: 88407 - 88754 (-)
Gene ID: MGYG000002619_5_89
Type: TC
Location: 88770 - 90050 (-)
Type: TC
Location: 88770 - 90050 (-)
Gene ID: MGYG000002619_5_90
Type: TC
Location: 90419 - 92302 (-)
Type: TC
Location: 90419 - 92302 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_J
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.