Cluster: MGYG000002609_CGC30
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002609
- CGC Family ID: CGCFAM_01525
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002609_19 | MGYG000002609_19_46 | 46305 | 47846 | + | 3.A.1.1.10 |
| TC | MGYG000002609_19 | MGYG000002609_19_47 | 47861 | 48727 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | MGYG000002609_19 | MGYG000002609_19_48 | 49664 | 50410 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000002609_19 | MGYG000002609_19_49 | 50534 | 50893 | - | DDE_Tnp_IS66 |
| TC | MGYG000002609_19 | MGYG000002609_19_50 | 51734 | 53494 | + | 3.A.1.111.2 |
| NULL(UNKNOWN) | MGYG000002609_19 | MGYG000002609_19_51 | 53515 | 53823 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000002609_19 | MGYG000002609_19_52 | 53813 | 54148 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002609_19 | MGYG000002609_19_53 | 54145 | 55917 | + | 3.A.1.111.2 |
| CAZyme | MGYG000002609_19 | MGYG000002609_19_54 | 56641 | 57375 | + | CE12 |
| NULL(UNKNOWN) | MGYG000002609_19 | MGYG000002609_19_55 | 57488 | 58183 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002609_19 | MGYG000002609_19_56 | 58392 | 59981 | + | GH28 |
Gene ID: MGYG000002609_19_46
Type: TC
Location: 46305 - 47846 (+)
Type: TC
Location: 46305 - 47846 (+)
Gene ID: MGYG000002609_19_47
Type: TC
Location: 47861 - 48727 (+)
Type: TC
Location: 47861 - 48727 (+)
Gene ID: MGYG000002609_19_48
Type:
Location: 49664 - 50410 (+)
Type:
Location: 49664 - 50410 (+)
Gene ID: MGYG000002609_19_49
Type: pfam
Location: 50534 - 50893 (-)
Type: pfam
Location: 50534 - 50893 (-)
Gene ID: MGYG000002609_19_50
Type: TC
Location: 51734 - 53494 (+)
Type: TC
Location: 51734 - 53494 (+)
Gene ID: MGYG000002609_19_51
Type:
Location: 53515 - 53823 (+)
Type:
Location: 53515 - 53823 (+)
Gene ID: MGYG000002609_19_52
Type:
Location: 53813 - 54148 (+)
Type:
Location: 53813 - 54148 (+)
Gene ID: MGYG000002609_19_53
Type: TC
Location: 54145 - 55917 (+)
Type: TC
Location: 54145 - 55917 (+)
Gene ID: MGYG000002609_19_54
Type: CAZyme
Location: 56641 - 57375 (+)
Type: CAZyme
Location: 56641 - 57375 (+)
Gene ID: MGYG000002609_19_55
Type:
Location: 57488 - 58183 (+)
Type:
Location: 57488 - 58183 (+)
Gene ID: MGYG000002609_19_56
Type: CAZyme
Location: 58392 - 59981 (+)
Type: CAZyme
Location: 58392 - 59981 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp003486385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.