Cluster: MGYG000002592_CGC6
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: MGYG000002592
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002592_3 | MGYG000002592_3_102 | 150984 | 152993 | - | GH164 |
| CAZyme | MGYG000002592_3 | MGYG000002592_3_103 | 152997 | 156266 | - | GH2 |
| CAZyme | MGYG000002592_3 | MGYG000002592_3_104 | 156480 | 157889 | + | GH5 |
| TC | MGYG000002592_3 | MGYG000002592_3_105 | 158147 | 161443 | + | 1.B.14.6.1 |
| pfam | MGYG000002592_3 | MGYG000002592_3_106 | 161455 | 163224 | + | SusD_RagB | SusD-like_3 |
| TC | MGYG000002592_3 | MGYG000002592_3_107 | 163266 | 166103 | + | 1.B.14.6.1 |
| pfam | MGYG000002592_3 | MGYG000002592_3_108 | 166130 | 167788 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | MGYG000002592_3 | MGYG000002592_3_109 | 167807 | 168340 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002592_3 | MGYG000002592_3_110 | 168432 | 169868 | + | GH140 |
Gene ID: MGYG000002592_3_102
Type: CAZyme
Location: 150984 - 152993 (-)
Type: CAZyme
Location: 150984 - 152993 (-)
Gene ID: MGYG000002592_3_103
Type: CAZyme
Location: 152997 - 156266 (-)
Type: CAZyme
Location: 152997 - 156266 (-)
Gene ID: MGYG000002592_3_104
Type: CAZyme
Location: 156480 - 157889 (+)
Type: CAZyme
Location: 156480 - 157889 (+)
Gene ID: MGYG000002592_3_105
Type: TC
Location: 158147 - 161443 (+)
Type: TC
Location: 158147 - 161443 (+)
Gene ID: MGYG000002592_3_106
Type: pfam
Location: 161455 - 163224 (+)
Type: pfam
Location: 161455 - 163224 (+)
Gene ID: MGYG000002592_3_107
Type: TC
Location: 163266 - 166103 (+)
Type: TC
Location: 163266 - 166103 (+)
Gene ID: MGYG000002592_3_108
Type: pfam
Location: 166130 - 167788 (+)
Type: pfam
Location: 166130 - 167788 (+)
Gene ID: MGYG000002592_3_109
Type:
Location: 167807 - 168340 (+)
Type:
Location: 167807 - 168340 (+)
Gene ID: MGYG000002592_3_110
Type: CAZyme
Location: 168432 - 169868 (+)
Type: CAZyme
Location: 168432 - 169868 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp902388705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002592_3_102 | vegetarian > vegan | 1.04783 | 0.00688 |
| MGYG000002592_3_104 | vegetarian > vegan | 1.02204 | 0.00688 |
| MGYG000002592_3_106 | vegetarian > vegan | 1.00805 | 0.00688 |
| MGYG000002592_3_110 | vegetarian > vegan | 1.14011 | 0.00688 |