Cluster: MGYG000002592_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002592
- CGC Family ID: CGCFAM_04860
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002592_59 | MGYG000002592_59_1 | 2 | 2455 | + | GH92 |
| TC | MGYG000002592_59 | MGYG000002592_59_2 | 2857 | 5901 | + | 1.B.14.6.1 |
| TC | MGYG000002592_59 | MGYG000002592_59_3 | 5923 | 7566 | + | 8.A.46.1.6 |
| pfam | MGYG000002592_59 | MGYG000002592_59_4 | 7596 | 8522 | + | Laminin_G_3 |
| CAZyme | MGYG000002592_59 | MGYG000002592_59_5 | 8536 | 11982 | + | GH38 |
Gene ID: MGYG000002592_59_1
Type: CAZyme
Location: 2 - 2455 (+)
Type: CAZyme
Location: 2 - 2455 (+)
Gene ID: MGYG000002592_59_2
Type: TC
Location: 2857 - 5901 (+)
Type: TC
Location: 2857 - 5901 (+)
Gene ID: MGYG000002592_59_3
Type: TC
Location: 5923 - 7566 (+)
Type: TC
Location: 5923 - 7566 (+)
Gene ID: MGYG000002592_59_4
Type: pfam
Location: 7596 - 8522 (+)
Type: pfam
Location: 7596 - 8522 (+)
Gene ID: MGYG000002592_59_5
Type: CAZyme
Location: 8536 - 11982 (+)
Type: CAZyme
Location: 8536 - 11982 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp902388705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002592_59_1 | omnivore > vegan | 1.28644 | 0.04294 |
| MGYG000002592_59_2 | omnivore > vegan | 1.29647 | 0.04294 |
| MGYG000002592_59_3 | omnivore > vegan | 1.39464 | 0.04294 |
| MGYG000002592_59_4 | omnivore > vegan | 1.30753 | 0.04294 |
| MGYG000002592_59_5 | omnivore > vegan | 1.38434 | 0.04294 |