Cluster: MGYG000002592_CGC31
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002592
- CGC Family ID: CGCFAM_00475
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002592_32 | MGYG000002592_32_11 | 10911 | 11261 | + | 3.D.1.8.1 |
| TC | MGYG000002592_32 | MGYG000002592_32_12 | 11282 | 11905 | + | 3.D.1.3.1 |
| TC | MGYG000002592_32 | MGYG000002592_32_13 | 11902 | 13515 | + | 3.D.1.5.1 |
| TC | MGYG000002592_32 | MGYG000002592_32_14 | 13536 | 14612 | + | 3.D.1.5.1 |
| STP | MGYG000002592_32 | MGYG000002592_32_15 | 14615 | 15055 | + | Fer4 | Fer4 |
| TC | MGYG000002592_32 | MGYG000002592_32_16 | 15059 | 15568 | + | 3.D.9.1.1 |
| TC | MGYG000002592_32 | MGYG000002592_32_17 | 15582 | 15890 | + | 3.D.1.2.1 |
| TC | MGYG000002592_32 | MGYG000002592_32_18 | 15913 | 17805 | + | 3.D.9.1.1 |
| TC | MGYG000002592_32 | MGYG000002592_32_19 | 17818 | 19302 | + | 3.D.1.2.1 |
| TC | MGYG000002592_32 | MGYG000002592_32_20 | 19309 | 20736 | + | 3.D.1.8.1 |
| pfam | MGYG000002592_32 | MGYG000002592_32_21 | 20830 | 21321 | - | DNA_binding_1 | Methyltransf_1N |
| TC | MGYG000002592_32 | MGYG000002592_32_22 | 21334 | 23469 | - | 8.A.51.1.1 |
| NULL(UNKNOWN) | MGYG000002592_32 | MGYG000002592_32_23 | 23485 | 24171 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002592_32 | MGYG000002592_32_24 | 24183 | 25190 | - | GH73 |
Gene ID: MGYG000002592_32_11
Type: TC
Location: 10911 - 11261 (+)
Type: TC
Location: 10911 - 11261 (+)
Gene ID: MGYG000002592_32_12
Type: TC
Location: 11282 - 11905 (+)
Type: TC
Location: 11282 - 11905 (+)
Gene ID: MGYG000002592_32_13
Type: TC
Location: 11902 - 13515 (+)
Type: TC
Location: 11902 - 13515 (+)
Gene ID: MGYG000002592_32_14
Type: TC
Location: 13536 - 14612 (+)
Type: TC
Location: 13536 - 14612 (+)
Gene ID: MGYG000002592_32_15
Type: STP
Location: 14615 - 15055 (+)
Type: STP
Location: 14615 - 15055 (+)
Gene ID: MGYG000002592_32_16
Type: TC
Location: 15059 - 15568 (+)
Type: TC
Location: 15059 - 15568 (+)
Gene ID: MGYG000002592_32_17
Type: TC
Location: 15582 - 15890 (+)
Type: TC
Location: 15582 - 15890 (+)
Gene ID: MGYG000002592_32_18
Type: TC
Location: 15913 - 17805 (+)
Type: TC
Location: 15913 - 17805 (+)
Gene ID: MGYG000002592_32_19
Type: TC
Location: 17818 - 19302 (+)
Type: TC
Location: 17818 - 19302 (+)
Gene ID: MGYG000002592_32_20
Type: TC
Location: 19309 - 20736 (+)
Type: TC
Location: 19309 - 20736 (+)
Gene ID: MGYG000002592_32_21
Type: pfam
Location: 20830 - 21321 (-)
Type: pfam
Location: 20830 - 21321 (-)
Gene ID: MGYG000002592_32_22
Type: TC
Location: 21334 - 23469 (-)
Type: TC
Location: 21334 - 23469 (-)
Gene ID: MGYG000002592_32_23
Type:
Location: 23485 - 24171 (-)
Type:
Location: 23485 - 24171 (-)
Gene ID: MGYG000002592_32_24
Type: CAZyme
Location: 24183 - 25190 (-)
Type: CAZyme
Location: 24183 - 25190 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp902388705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002592_32_21 | vegan > omnivore | 1.70560 | 0.00012 |
| MGYG000002592_32_21 | vegetarian > omnivore | 1.53923 | 0.00791 |