Cluster: MGYG000002592_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000002592
- CGC Family ID: CGCFAM_03098
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002592_3 | MGYG000002592_3_30 | 44245 | 45519 | + | GH26 |
| TC | MGYG000002592_3 | MGYG000002592_3_31 | 45555 | 48839 | + | 1.B.14.6.1 |
| pfam | MGYG000002592_3 | MGYG000002592_3_32 | 48853 | 50694 | + | SusD_RagB | SusD-like_3 |
| TC | MGYG000002592_3 | MGYG000002592_3_33 | 50731 | 53607 | + | 1.B.14.6.13 |
| pfam | MGYG000002592_3 | MGYG000002592_3_34 | 53627 | 55297 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | MGYG000002592_3 | MGYG000002592_3_35 | 55325 | 55879 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002592_3 | MGYG000002592_3_36 | 55950 | 57614 | + | GH5 |
| CAZyme | MGYG000002592_3 | MGYG000002592_3_37 | 57646 | 60480 | + | GH2 |
| pfam | MGYG000002592_3 | MGYG000002592_3_38 | 60677 | 61894 | - | GlcNAc_2-epim |
| TC | MGYG000002592_3 | MGYG000002592_3_39 | 61897 | 63315 | - | 2.A.2.3.5 |
| CAZyme | MGYG000002592_3 | MGYG000002592_3_40 | 63317 | 64483 | - | GH130_1 |
| CAZyme | MGYG000002592_3 | MGYG000002592_3_41 | 64503 | 66851 | - | GH26 | GH5_7 |
| CAZyme | MGYG000002592_3 | MGYG000002592_3_42 | 67078 | 68565 | + | GH173 |
Gene ID: MGYG000002592_3_30
Type: CAZyme
Location: 44245 - 45519 (+)
Type: CAZyme
Location: 44245 - 45519 (+)
Gene ID: MGYG000002592_3_31
Type: TC
Location: 45555 - 48839 (+)
Type: TC
Location: 45555 - 48839 (+)
Gene ID: MGYG000002592_3_32
Type: pfam
Location: 48853 - 50694 (+)
Type: pfam
Location: 48853 - 50694 (+)
Gene ID: MGYG000002592_3_33
Type: TC
Location: 50731 - 53607 (+)
Type: TC
Location: 50731 - 53607 (+)
Gene ID: MGYG000002592_3_34
Type: pfam
Location: 53627 - 55297 (+)
Type: pfam
Location: 53627 - 55297 (+)
Gene ID: MGYG000002592_3_35
Type:
Location: 55325 - 55879 (+)
Type:
Location: 55325 - 55879 (+)
Gene ID: MGYG000002592_3_36
Type: CAZyme
Location: 55950 - 57614 (+)
Type: CAZyme
Location: 55950 - 57614 (+)
Gene ID: MGYG000002592_3_37
Type: CAZyme
Location: 57646 - 60480 (+)
Type: CAZyme
Location: 57646 - 60480 (+)
Gene ID: MGYG000002592_3_38
Type: pfam
Location: 60677 - 61894 (-)
Type: pfam
Location: 60677 - 61894 (-)
Gene ID: MGYG000002592_3_39
Type: TC
Location: 61897 - 63315 (-)
Type: TC
Location: 61897 - 63315 (-)
Gene ID: MGYG000002592_3_40
Type: CAZyme
Location: 63317 - 64483 (-)
Type: CAZyme
Location: 63317 - 64483 (-)
Gene ID: MGYG000002592_3_41
Type: CAZyme
Location: 64503 - 66851 (-)
Type: CAZyme
Location: 64503 - 66851 (-)
Gene ID: MGYG000002592_3_42
Type: CAZyme
Location: 67078 - 68565 (+)
Type: CAZyme
Location: 67078 - 68565 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp902388705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.