Cluster: MGYG000002592_CGC22
🧬 Cluster Details
- Gene Count: 23
- CAZyme Count: 13
- Substrate:
- Genome ID: MGYG000002592
- CGC Family ID: CGCFAM_03998
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002592_14 | MGYG000002592_14_2 | 2489 | 5056 | + | GH38 |
| CAZyme | MGYG000002592_14 | MGYG000002592_14_3 | 5066 | 7402 | + | GH92 |
| CAZyme | MGYG000002592_14 | MGYG000002592_14_4 | 7435 | 9759 | + | GH92 |
| CAZyme | MGYG000002592_14 | MGYG000002592_14_5 | 9797 | 11953 | + | GH92 |
| pfam | MGYG000002592_14 | MGYG000002592_14_6 | 11988 | 13364 | + | Lipase_GDSL | Lipase_GDSL_2 |
| sulfatase | MGYG000002592_14 | MGYG000002592_14_7 | 13596 | 14930 | - | S1_71 |
| TC | MGYG000002592_14 | MGYG000002592_14_8 | 15066 | 16352 | - | 2.A.1.33.2 |
| TF | MGYG000002592_14 | MGYG000002592_14_9 | 16451 | 20488 | - | HTH_AraC |
| CAZyme | MGYG000002592_14 | MGYG000002592_14_10 | 20709 | 22688 | - | CE20 | CE20 |
| pfam | MGYG000002592_14 | MGYG000002592_14_11 | 22710 | 23429 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | MGYG000002592_14 | MGYG000002592_14_12 | 23460 | 24890 | - | CE20 |
| CAZyme | MGYG000002592_14 | MGYG000002592_14_13 | 24898 | 27837 | - | CBM32 | GH2 |
| pfam | MGYG000002592_14 | MGYG000002592_14_14 | 28046 | 29842 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000002592_14 | MGYG000002592_14_15 | 29863 | 32895 | - | 1.B.14.6.1 |
| pfam | MGYG000002592_14 | MGYG000002592_14_16 | 33183 | 34847 | - | GxGYxYP_C | GxGYxYP_N | GxGYxYP_N_2nd | GxGYxYP_N_3rd |
| CAZyme | MGYG000002592_14 | MGYG000002592_14_17 | 34907 | 35938 | - | GH130_4 |
| CAZyme | MGYG000002592_14 | MGYG000002592_14_18 | 36492 | 38669 | + | GH36 |
| pfam | MGYG000002592_14 | MGYG000002592_14_19 | 38736 | 39899 | + | HGSNAT_cat |
| CAZyme | MGYG000002592_14 | MGYG000002592_14_20 | 39904 | 41721 | + | GH20 |
| CAZyme | MGYG000002592_14 | MGYG000002592_14_21 | 42095 | 45037 | + | GH115 |
| CAZyme | MGYG000002592_14 | MGYG000002592_14_22 | 45168 | 47489 | - | GH92 |
| peptidase | MGYG000002592_14 | MGYG000002592_14_23 | 47599 | 48447 | - | S09.UPW |
| CAZyme | MGYG000002592_14 | MGYG000002592_14_24 | 48482 | 49042 | - | GH78 |
Gene ID: MGYG000002592_14_2
Type: CAZyme
Location: 2489 - 5056 (+)
Type: CAZyme
Location: 2489 - 5056 (+)
Gene ID: MGYG000002592_14_3
Type: CAZyme
Location: 5066 - 7402 (+)
Type: CAZyme
Location: 5066 - 7402 (+)
Gene ID: MGYG000002592_14_4
Type: CAZyme
Location: 7435 - 9759 (+)
Type: CAZyme
Location: 7435 - 9759 (+)
Gene ID: MGYG000002592_14_5
Type: CAZyme
Location: 9797 - 11953 (+)
Type: CAZyme
Location: 9797 - 11953 (+)
Gene ID: MGYG000002592_14_6
Type: pfam
Location: 11988 - 13364 (+)
Type: pfam
Location: 11988 - 13364 (+)
Gene ID: MGYG000002592_14_7
Type: sulfatase
Location: 13596 - 14930 (-)
Type: sulfatase
Location: 13596 - 14930 (-)
Gene ID: MGYG000002592_14_8
Type: TC
Location: 15066 - 16352 (-)
Type: TC
Location: 15066 - 16352 (-)
Gene ID: MGYG000002592_14_9
Type: TF
Location: 16451 - 20488 (-)
Type: TF
Location: 16451 - 20488 (-)
Gene ID: MGYG000002592_14_10
Type: CAZyme
Location: 20709 - 22688 (-)
Type: CAZyme
Location: 20709 - 22688 (-)
Gene ID: MGYG000002592_14_11
Type: pfam
Location: 22710 - 23429 (-)
Type: pfam
Location: 22710 - 23429 (-)
Gene ID: MGYG000002592_14_12
Type: CAZyme
Location: 23460 - 24890 (-)
Type: CAZyme
Location: 23460 - 24890 (-)
Gene ID: MGYG000002592_14_13
Type: CAZyme
Location: 24898 - 27837 (-)
Type: CAZyme
Location: 24898 - 27837 (-)
Gene ID: MGYG000002592_14_14
Type: pfam
Location: 28046 - 29842 (-)
Type: pfam
Location: 28046 - 29842 (-)
Gene ID: MGYG000002592_14_15
Type: TC
Location: 29863 - 32895 (-)
Type: TC
Location: 29863 - 32895 (-)
Gene ID: MGYG000002592_14_16
Type: pfam
Location: 33183 - 34847 (-)
Type: pfam
Location: 33183 - 34847 (-)
Gene ID: MGYG000002592_14_17
Type: CAZyme
Location: 34907 - 35938 (-)
Type: CAZyme
Location: 34907 - 35938 (-)
Gene ID: MGYG000002592_14_18
Type: CAZyme
Location: 36492 - 38669 (+)
Type: CAZyme
Location: 36492 - 38669 (+)
Gene ID: MGYG000002592_14_19
Type: pfam
Location: 38736 - 39899 (+)
Type: pfam
Location: 38736 - 39899 (+)
Gene ID: MGYG000002592_14_20
Type: CAZyme
Location: 39904 - 41721 (+)
Type: CAZyme
Location: 39904 - 41721 (+)
Gene ID: MGYG000002592_14_21
Type: CAZyme
Location: 42095 - 45037 (+)
Type: CAZyme
Location: 42095 - 45037 (+)
Gene ID: MGYG000002592_14_22
Type: CAZyme
Location: 45168 - 47489 (-)
Type: CAZyme
Location: 45168 - 47489 (-)
Gene ID: MGYG000002592_14_23
Type: peptidase
Location: 47599 - 48447 (-)
Type: peptidase
Location: 47599 - 48447 (-)
Gene ID: MGYG000002592_14_24
Type: CAZyme
Location: 48482 - 49042 (-)
Type: CAZyme
Location: 48482 - 49042 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp902388705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002592_14_2 | omnivore > vegan | 1.26876 | 0.04294 |
| MGYG000002592_14_2 | vegetarian > vegan | 1.05122 | 0.00688 |
| MGYG000002592_14_3 | omnivore > vegan | 1.21114 | 0.04294 |
| MGYG000002592_14_4 | omnivore > vegan | 1.06438 | 0.04294 |
| MGYG000002592_14_5 | omnivore > vegan | 1.18000 | 0.04294 |
| MGYG000002592_14_6 | omnivore > vegan | 1.18344 | 0.04294 |
| MGYG000002592_14_7 | vegan > omnivore | 3.46978 | 0.02379 |
| MGYG000002592_14_7 | vegetarian > omnivore | 4.56141 | 0.00791 |
| MGYG000002592_14_7 | vegetarian > vegan | 1.09163 | 0.00688 |
| MGYG000002592_14_21 | omnivore > vegan | 1.33003 | 0.04294 |
| MGYG000002592_14_23 | vegetarian > vegan | 1.02339 | 0.00688 |
| MGYG000002592_14_23 | omnivore > vegan | 1.50663 | 0.04294 |
| MGYG000002592_14_24 | vegetarian > vegan | 2.90243 | 0.00688 |
| MGYG000002592_14_24 | vegetarian > omnivore | 1.77650 | 0.02357 |