Cluster: MGYG000002592_CGC18
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002592
- CGC Family ID: CGCFAM_03314
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002592_10 | MGYG000002592_10_9 | 11749 | 15018 | - | 1.B.14.6.1 |
| peptidase | MGYG000002592_10 | MGYG000002592_10_10 | 15442 | 18261 | + | M06.UPW |
| NULL(UNKNOWN) | MGYG000002592_10 | MGYG000002592_10_11 | 18274 | 18681 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002592_10 | MGYG000002592_10_12 | 18788 | 22057 | - | GH106 |
| CAZyme | MGYG000002592_10 | MGYG000002592_10_13 | 22093 | 24111 | - | GH127 |
| CAZyme | MGYG000002592_10 | MGYG000002592_10_14 | 24108 | 27281 | - | GH106 |
| NULL(UNKNOWN) | MGYG000002592_10 | MGYG000002592_10_15 | 27316 | 29457 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002592_10 | MGYG000002592_10_16 | 29734 | 33327 | - | GH38 |
Gene ID: MGYG000002592_10_9
Type: TC
Location: 11749 - 15018 (-)
Type: TC
Location: 11749 - 15018 (-)
Gene ID: MGYG000002592_10_10
Type: peptidase
Location: 15442 - 18261 (+)
Type: peptidase
Location: 15442 - 18261 (+)
Gene ID: MGYG000002592_10_11
Type:
Location: 18274 - 18681 (+)
Type:
Location: 18274 - 18681 (+)
Gene ID: MGYG000002592_10_12
Type: CAZyme
Location: 18788 - 22057 (-)
Type: CAZyme
Location: 18788 - 22057 (-)
Gene ID: MGYG000002592_10_13
Type: CAZyme
Location: 22093 - 24111 (-)
Type: CAZyme
Location: 22093 - 24111 (-)
Gene ID: MGYG000002592_10_14
Type: CAZyme
Location: 24108 - 27281 (-)
Type: CAZyme
Location: 24108 - 27281 (-)
Gene ID: MGYG000002592_10_15
Type:
Location: 27316 - 29457 (-)
Type:
Location: 27316 - 29457 (-)
Gene ID: MGYG000002592_10_16
Type: CAZyme
Location: 29734 - 33327 (-)
Type: CAZyme
Location: 29734 - 33327 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp902388705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002592_10_9 | vegetarian > omnivore | 5.52700 | 0.02357 |
| MGYG000002592_10_9 | vegetarian > vegan | 1.79290 | 0.00688 |
| MGYG000002592_10_12 | vegetarian > omnivore | 4.97500 | 0.00791 |
| MGYG000002592_10_12 | vegetarian > vegan | 2.36766 | 0.00688 |
| MGYG000002592_10_13 | vegan > omnivore | 2.29778 | 0.00012 |
| MGYG000002592_10_13 | vegetarian > omnivore | 4.41304 | 0.00791 |
| MGYG000002592_10_13 | vegetarian > vegan | 2.11526 | 0.00688 |
| MGYG000002592_10_14 | vegetarian > omnivore | 7.25190 | 0.02357 |
| MGYG000002592_10_14 | vegetarian > vegan | 2.71682 | 0.00688 |
| MGYG000002592_10_15 | vegetarian > omnivore | 6.43949 | 0.00791 |
| MGYG000002592_10_15 | vegetarian > vegan | 2.18747 | 0.00688 |