Cluster: MGYG000002582_CGC4
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002582
- CGC Family ID: CGCFAM_01211
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002582_3 | MGYG000002582_3_56 | 65634 | 66635 | + | GH23 |
| TC | MGYG000002582_3 | MGYG000002582_3_57 | 66692 | 67495 | - | 1.A.1.14.5 |
| pfam | MGYG000002582_3 | MGYG000002582_3_58 | 67507 | 69591 | - | BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | PTCB-BRCT | HHH_2 | HHH_5 |
| pfam | MGYG000002582_3 | MGYG000002582_3_59 | 69594 | 70355 | - | ZipA_C |
| TC | MGYG000002582_3 | MGYG000002582_3_60 | 70474 | 71238 | + | 2.A.121.1.1 |
| TC | MGYG000002582_3 | MGYG000002582_3_61 | 71242 | 72903 | + | 8.A.7.1.4 |
| TC | MGYG000002582_3 | MGYG000002582_3_62 | 73001 | 73534 | + | 4.A.3.2.5 |
| TC | MGYG000002582_3 | MGYG000002582_3_63 | 73594 | 74991 | - | 3.D.2.1.1 |
| TC | MGYG000002582_3 | MGYG000002582_3_64 | 75013 | 76539 | - | 3.D.2.1.1 |
Gene ID: MGYG000002582_3_56
Type: CAZyme
Location: 65634 - 66635 (+)
Type: CAZyme
Location: 65634 - 66635 (+)
Gene ID: MGYG000002582_3_57
Type: TC
Location: 66692 - 67495 (-)
Type: TC
Location: 66692 - 67495 (-)
Gene ID: MGYG000002582_3_58
Type: pfam
Location: 67507 - 69591 (-)
Type: pfam
Location: 67507 - 69591 (-)
Gene ID: MGYG000002582_3_59
Type: pfam
Location: 69594 - 70355 (-)
Type: pfam
Location: 69594 - 70355 (-)
Gene ID: MGYG000002582_3_60
Type: TC
Location: 70474 - 71238 (+)
Type: TC
Location: 70474 - 71238 (+)
Gene ID: MGYG000002582_3_61
Type: TC
Location: 71242 - 72903 (+)
Type: TC
Location: 71242 - 72903 (+)
Gene ID: MGYG000002582_3_62
Type: TC
Location: 73001 - 73534 (+)
Type: TC
Location: 73001 - 73534 (+)
Gene ID: MGYG000002582_3_63
Type: TC
Location: 73594 - 74991 (-)
Type: TC
Location: 73594 - 74991 (-)
Gene ID: MGYG000002582_3_64
Type: TC
Location: 75013 - 76539 (-)
Type: TC
Location: 75013 - 76539 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio sp900552905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.