Cluster: MGYG000002579_CGC8
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002579
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002579_5 | MGYG000002579_5_5 | 3541 | 5193 | - | 3.A.1.106.11 |
| TC | MGYG000002579_5 | MGYG000002579_5_6 | 5186 | 6877 | - | 3.A.1.129.1 |
| pfam | MGYG000002579_5 | MGYG000002579_5_7 | 6870 | 7271 | - | DUF454 |
| pfam | MGYG000002579_5 | MGYG000002579_5_8 | 7359 | 8798 | - | Amidase |
| CAZyme | MGYG000002579_5 | MGYG000002579_5_9 | 8898 | 10292 | - | GH1 |
| TC | MGYG000002579_5 | MGYG000002579_5_10 | 10368 | 11675 | - | 4.A.3.2.9 |
| TF | MGYG000002579_5 | MGYG000002579_5_11 | 11881 | 12591 | + | GntR |
| STP | MGYG000002579_5 | MGYG000002579_5_12 | 12620 | 12997 | - | Glyoxalase |
| TC | MGYG000002579_5 | MGYG000002579_5_13 | 12994 | 14319 | - | 2.A.66.1.37 |
Gene ID: MGYG000002579_5_5
Type: TC
Location: 3541 - 5193 (-)
Type: TC
Location: 3541 - 5193 (-)
Gene ID: MGYG000002579_5_6
Type: TC
Location: 5186 - 6877 (-)
Type: TC
Location: 5186 - 6877 (-)
Gene ID: MGYG000002579_5_7
Type: pfam
Location: 6870 - 7271 (-)
Type: pfam
Location: 6870 - 7271 (-)
Gene ID: MGYG000002579_5_8
Type: pfam
Location: 7359 - 8798 (-)
Type: pfam
Location: 7359 - 8798 (-)
Gene ID: MGYG000002579_5_9
Type: CAZyme
Location: 8898 - 10292 (-)
Type: CAZyme
Location: 8898 - 10292 (-)
Gene ID: MGYG000002579_5_10
Type: TC
Location: 10368 - 11675 (-)
Type: TC
Location: 10368 - 11675 (-)
Gene ID: MGYG000002579_5_11
Type: TF
Location: 11881 - 12591 (+)
Type: TF
Location: 11881 - 12591 (+)
Gene ID: MGYG000002579_5_12
Type: STP
Location: 12620 - 12997 (-)
Type: STP
Location: 12620 - 12997 (-)
Gene ID: MGYG000002579_5_13
Type: TC
Location: 12994 - 14319 (-)
Type: TC
Location: 12994 - 14319 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus sp900765635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.