Cluster: MGYG000002579_CGC25
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002579
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002579_19 | MGYG000002579_19_14 | 13890 | 15659 | + | CBM34 | GH13_20 |
| NULL(UNKNOWN) | MGYG000002579_19 | MGYG000002579_19_15 | 15851 | 16048 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000002579_19 | MGYG000002579_19_16 | 16064 | 16657 | + | SBP_bac_3 |
| TC | MGYG000002579_19 | MGYG000002579_19_17 | 16678 | 17352 | + | 3.A.1.3.20 |
| pfam | MGYG000002579_19 | MGYG000002579_19_18 | 17416 | 18231 | + | Hydrolase_3 |
| CAZyme | MGYG000002579_19 | MGYG000002579_19_19 | 18324 | 19583 | - | CBM50 | CBM50 |
| pfam | MGYG000002579_19 | MGYG000002579_19_20 | 20140 | 20997 | - | QRPTase_C | QRPTase_N |
| TC | MGYG000002579_19 | MGYG000002579_19_21 | 21003 | 22190 | - | 2.A.1.82.4 |
| sulfatase | MGYG000002579_19 | MGYG000002579_19_22 | 22435 | 23217 | - | S1_2 |
| TC | MGYG000002579_19 | MGYG000002579_19_23 | 23299 | 23841 | - | 3.A.1.26.10 |
| TC | MGYG000002579_19 | MGYG000002579_19_24 | 24092 | 25717 | - | 3.A.1.5.25 |
| TC | MGYG000002579_19 | MGYG000002579_19_25 | 25904 | 26704 | - | 3.A.1.15.3 |
| TC | MGYG000002579_19 | MGYG000002579_19_26 | 26704 | 27363 | - | 3.A.1.15.12 |
Gene ID: MGYG000002579_19_14
Type: CAZyme
Location: 13890 - 15659 (+)
Type: CAZyme
Location: 13890 - 15659 (+)
Gene ID: MGYG000002579_19_15
Type:
Location: 15851 - 16048 (+)
Type:
Location: 15851 - 16048 (+)
Gene ID: MGYG000002579_19_16
Type: STP
Location: 16064 - 16657 (+)
Type: STP
Location: 16064 - 16657 (+)
Gene ID: MGYG000002579_19_17
Type: TC
Location: 16678 - 17352 (+)
Type: TC
Location: 16678 - 17352 (+)
Gene ID: MGYG000002579_19_18
Type: pfam
Location: 17416 - 18231 (+)
Type: pfam
Location: 17416 - 18231 (+)
Gene ID: MGYG000002579_19_19
Type: CAZyme
Location: 18324 - 19583 (-)
Type: CAZyme
Location: 18324 - 19583 (-)
Gene ID: MGYG000002579_19_20
Type: pfam
Location: 20140 - 20997 (-)
Type: pfam
Location: 20140 - 20997 (-)
Gene ID: MGYG000002579_19_21
Type: TC
Location: 21003 - 22190 (-)
Type: TC
Location: 21003 - 22190 (-)
Gene ID: MGYG000002579_19_22
Type: sulfatase
Location: 22435 - 23217 (-)
Type: sulfatase
Location: 22435 - 23217 (-)
Gene ID: MGYG000002579_19_23
Type: TC
Location: 23299 - 23841 (-)
Type: TC
Location: 23299 - 23841 (-)
Gene ID: MGYG000002579_19_24
Type: TC
Location: 24092 - 25717 (-)
Type: TC
Location: 24092 - 25717 (-)
Gene ID: MGYG000002579_19_25
Type: TC
Location: 25904 - 26704 (-)
Type: TC
Location: 25904 - 26704 (-)
Gene ID: MGYG000002579_19_26
Type: TC
Location: 26704 - 27363 (-)
Type: TC
Location: 26704 - 27363 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus sp900765635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.