Cluster: MGYG000002579_CGC14
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002579
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002579_7 | MGYG000002579_7_7 | 7689 | 9170 | - | GH1 |
| pfam | MGYG000002579_7 | MGYG000002579_7_8 | 9205 | 9426 | - | His_Phos_1 |
| NULL(UNKNOWN) | MGYG000002579_7 | MGYG000002579_7_9 | 9711 | 9845 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002579_7 | MGYG000002579_7_10 | 9875 | 10225 | - | 4.A.3.2.2 |
| TC | MGYG000002579_7 | MGYG000002579_7_11 | 10260 | 10580 | - | 4.A.3.2.4 |
| TF | MGYG000002579_7 | MGYG000002579_7_12 | 10728 | 11441 | + | GntR |
| TC | MGYG000002579_7 | MGYG000002579_7_13 | 11581 | 12573 | - | 3.A.1.5.25 |
| TC | MGYG000002579_7 | MGYG000002579_7_14 | 12689 | 13093 | - | 3.A.1.5.25 |
| TC | MGYG000002579_7 | MGYG000002579_7_15 | 13234 | 14853 | - | 3.A.1.5.25 |
| pfam | MGYG000002579_7 | MGYG000002579_7_16 | 15008 | 15433 | + | 4HBT | 4HBT_2 |
| TC | MGYG000002579_7 | MGYG000002579_7_17 | 15690 | 16904 | - | 2.A.41.1.3 |
| TC | MGYG000002579_7 | MGYG000002579_7_18 | 17328 | 17957 | - | 3.A.1.122.13 |
| NULL(UNKNOWN) | MGYG000002579_7 | MGYG000002579_7_19 | 18090 | 18434 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000002579_7 | MGYG000002579_7_20 | 18654 | 18758 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002579_7 | MGYG000002579_7_21 | 19122 | 21770 | + | 3.A.3.2.41 |
Gene ID: MGYG000002579_7_7
Type: CAZyme
Location: 7689 - 9170 (-)
Type: CAZyme
Location: 7689 - 9170 (-)
Gene ID: MGYG000002579_7_8
Type: pfam
Location: 9205 - 9426 (-)
Type: pfam
Location: 9205 - 9426 (-)
Gene ID: MGYG000002579_7_9
Type:
Location: 9711 - 9845 (-)
Type:
Location: 9711 - 9845 (-)
Gene ID: MGYG000002579_7_10
Type: TC
Location: 9875 - 10225 (-)
Type: TC
Location: 9875 - 10225 (-)
Gene ID: MGYG000002579_7_11
Type: TC
Location: 10260 - 10580 (-)
Type: TC
Location: 10260 - 10580 (-)
Gene ID: MGYG000002579_7_12
Type: TF
Location: 10728 - 11441 (+)
Type: TF
Location: 10728 - 11441 (+)
Gene ID: MGYG000002579_7_13
Type: TC
Location: 11581 - 12573 (-)
Type: TC
Location: 11581 - 12573 (-)
Gene ID: MGYG000002579_7_14
Type: TC
Location: 12689 - 13093 (-)
Type: TC
Location: 12689 - 13093 (-)
Gene ID: MGYG000002579_7_15
Type: TC
Location: 13234 - 14853 (-)
Type: TC
Location: 13234 - 14853 (-)
Gene ID: MGYG000002579_7_16
Type: pfam
Location: 15008 - 15433 (+)
Type: pfam
Location: 15008 - 15433 (+)
Gene ID: MGYG000002579_7_17
Type: TC
Location: 15690 - 16904 (-)
Type: TC
Location: 15690 - 16904 (-)
Gene ID: MGYG000002579_7_18
Type: TC
Location: 17328 - 17957 (-)
Type: TC
Location: 17328 - 17957 (-)
Gene ID: MGYG000002579_7_19
Type:
Location: 18090 - 18434 (-)
Type:
Location: 18090 - 18434 (-)
Gene ID: MGYG000002579_7_20
Type:
Location: 18654 - 18758 (-)
Type:
Location: 18654 - 18758 (-)
Gene ID: MGYG000002579_7_21
Type: TC
Location: 19122 - 21770 (+)
Type: TC
Location: 19122 - 21770 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus sp900765635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.