Cluster: MGYG000002566_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002566
- CGC Family ID: CGCFAM_00008
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002566_41 | MGYG000002566_41_6 | 3066 | 3833 | - | 3.A.1.103.1 |
| TC | MGYG000002566_41 | MGYG000002566_41_7 | 3845 | 4690 | - | 3.A.1.103.6 |
| pfam | MGYG000002566_41 | MGYG000002566_41_8 | 4780 | 6648 | - | DUF6020 |
| CAZyme | MGYG000002566_41 | MGYG000002566_41_9 | 6707 | 7669 | + | GT81 |
| NULL(UNKNOWN) | MGYG000002566_41 | MGYG000002566_41_10 | 7675 | 7797 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002566_41 | MGYG000002566_41_11 | 7864 | 8643 | + | GT2 |
| TC | MGYG000002566_41 | MGYG000002566_41_12 | 8627 | 11032 | + | 9.B.144.1.5 |
Gene ID: MGYG000002566_41_6
Type: TC
Location: 3066 - 3833 (-)
Type: TC
Location: 3066 - 3833 (-)
Gene ID: MGYG000002566_41_7
Type: TC
Location: 3845 - 4690 (-)
Type: TC
Location: 3845 - 4690 (-)
Gene ID: MGYG000002566_41_8
Type: pfam
Location: 4780 - 6648 (-)
Type: pfam
Location: 4780 - 6648 (-)
Gene ID: MGYG000002566_41_9
Type: CAZyme
Location: 6707 - 7669 (+)
Type: CAZyme
Location: 6707 - 7669 (+)
Gene ID: MGYG000002566_41_10
Type:
Location: 7675 - 7797 (+)
Type:
Location: 7675 - 7797 (+)
Gene ID: MGYG000002566_41_11
Type: CAZyme
Location: 7864 - 8643 (+)
Type: CAZyme
Location: 7864 - 8643 (+)
Gene ID: MGYG000002566_41_12
Type: TC
Location: 8627 - 11032 (+)
Type: TC
Location: 8627 - 11032 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900550835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.