Cluster: MGYG000002557_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002557
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002557_10 | MGYG000002557_10_10 | 12402 | 13649 | - | 2.A.66.2.10 |
| NULL(UNKNOWN) | MGYG000002557_10 | MGYG000002557_10_11 | 13642 | 14898 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002557_10 | MGYG000002557_10_12 | 14895 | 15941 | - | GT2 |
| NULL(UNKNOWN) | MGYG000002557_10 | MGYG000002557_10_13 | 16072 | 16410 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000002557_10 | MGYG000002557_10_14 | 16394 | 17494 | - | Epimerase_2 |
| CAZyme | MGYG000002557_10 | MGYG000002557_10_15 | 17487 | 18293 | - | GT26 |
| TC | MGYG000002557_10 | MGYG000002557_10_16 | 18280 | 19029 | - | 9.B.18.1.2 |
Gene ID: MGYG000002557_10_10
Type: TC
Location: 12402 - 13649 (-)
Type: TC
Location: 12402 - 13649 (-)
Gene ID: MGYG000002557_10_11
Type:
Location: 13642 - 14898 (-)
Type:
Location: 13642 - 14898 (-)
Gene ID: MGYG000002557_10_12
Type: CAZyme
Location: 14895 - 15941 (-)
Type: CAZyme
Location: 14895 - 15941 (-)
Gene ID: MGYG000002557_10_13
Type:
Location: 16072 - 16410 (-)
Type:
Location: 16072 - 16410 (-)
Gene ID: MGYG000002557_10_14
Type: pfam
Location: 16394 - 17494 (-)
Type: pfam
Location: 16394 - 17494 (-)
Gene ID: MGYG000002557_10_15
Type: CAZyme
Location: 17487 - 18293 (-)
Type: CAZyme
Location: 17487 - 18293 (-)
Gene ID: MGYG000002557_10_16
Type: TC
Location: 18280 - 19029 (-)
Type: TC
Location: 18280 - 19029 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902388345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.