Cluster: MGYG000002557_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002557
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002557_21 | MGYG000002557_21_10 | 10579 | 11808 | + | 2.A.1.2.25 |
| CAZyme | MGYG000002557_21 | MGYG000002557_21_11 | 12052 | 13377 | + | GH4 |
| TC | MGYG000002557_21 | MGYG000002557_21_12 | 13402 | 14982 | + | 4.A.1.1.14 |
| TF | MGYG000002557_21 | MGYG000002557_21_13 | 15060 | 15860 | + | HTH_6 |
| TC | MGYG000002557_21 | MGYG000002557_21_14 | 16053 | 17615 | - | 4.A.1.1.13 |
| CAZyme | MGYG000002557_21 | MGYG000002557_21_15 | 17697 | 19022 | - | GH4 |
Gene ID: MGYG000002557_21_10
Type: TC
Location: 10579 - 11808 (+)
Type: TC
Location: 10579 - 11808 (+)
Gene ID: MGYG000002557_21_11
Type: CAZyme
Location: 12052 - 13377 (+)
Type: CAZyme
Location: 12052 - 13377 (+)
Gene ID: MGYG000002557_21_12
Type: TC
Location: 13402 - 14982 (+)
Type: TC
Location: 13402 - 14982 (+)
Gene ID: MGYG000002557_21_13
Type: TF
Location: 15060 - 15860 (+)
Type: TF
Location: 15060 - 15860 (+)
Gene ID: MGYG000002557_21_14
Type: TC
Location: 16053 - 17615 (-)
Type: TC
Location: 16053 - 17615 (-)
Gene ID: MGYG000002557_21_15
Type: CAZyme
Location: 17697 - 19022 (-)
Type: CAZyme
Location: 17697 - 19022 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902388345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.