Cluster: MGYG000002247_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002247
- CGC Family ID: CGCFAM_00005
- Continent: South America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002247_4 | MGYG000002247_4_68 | 85535 | 86179 | - | 9.B.18.1.3 |
| TC | MGYG000002247_4 | MGYG000002247_4_69 | 86232 | 88094 | - | 9.B.18.2.1 |
| CAZyme | MGYG000002247_4 | MGYG000002247_4_70 | 88163 | 89173 | - | GT2 |
| CAZyme | MGYG000002247_4 | MGYG000002247_4_71 | 89163 | 90461 | - | GT4 |
| CAZyme | MGYG000002247_4 | MGYG000002247_4_72 | 90458 | 91900 | - | GT4 |
| pfam | MGYG000002247_4 | MGYG000002247_4_73 | 91916 | 93076 | - | EpsG |
| CAZyme | MGYG000002247_4 | MGYG000002247_4_74 | 93163 | 93954 | - | GT2 |
Gene ID: MGYG000002247_4_68
Type: TC
Location: 85535 - 86179 (-)
Type: TC
Location: 85535 - 86179 (-)
Gene ID: MGYG000002247_4_69
Type: TC
Location: 86232 - 88094 (-)
Type: TC
Location: 86232 - 88094 (-)
Gene ID: MGYG000002247_4_70
Type: CAZyme
Location: 88163 - 89173 (-)
Type: CAZyme
Location: 88163 - 89173 (-)
Gene ID: MGYG000002247_4_71
Type: CAZyme
Location: 89163 - 90461 (-)
Type: CAZyme
Location: 89163 - 90461 (-)
Gene ID: MGYG000002247_4_72
Type: CAZyme
Location: 90458 - 91900 (-)
Type: CAZyme
Location: 90458 - 91900 (-)
Gene ID: MGYG000002247_4_73
Type: pfam
Location: 91916 - 93076 (-)
Type: pfam
Location: 91916 - 93076 (-)
Gene ID: MGYG000002247_4_74
Type: CAZyme
Location: 93163 - 93954 (-)
Type: CAZyme
Location: 93163 - 93954 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900771995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002247_4_70 | vegetarian > vegan | 1.20520 | 0.00229 |
| MGYG000002247_4_72 | vegetarian > vegan | 1.30379 | 0.00229 |