Cluster: MGYG000002247_CGC29
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002247
- CGC Family ID: CGCFAM_01573
- Continent: South America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002247_20 | MGYG000002247_20_18 | 17677 | 17910 | - | 3.D.1.6.4 |
| pfam | MGYG000002247_20 | MGYG000002247_20_19 | 18276 | 18515 | - | zf-like |
| NULL(UNKNOWN) | MGYG000002247_20 | MGYG000002247_20_20 | 18525 | 18686 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002247_20 | MGYG000002247_20_21 | 18856 | 19722 | - | 3.A.1.1.47 |
| TC | MGYG000002247_20 | MGYG000002247_20_22 | 19738 | 20646 | - | 3.A.1.1.4 |
| NULL(UNKNOWN) | MGYG000002247_20 | MGYG000002247_20_23 | 20870 | 22285 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000002247_20 | MGYG000002247_20_24 | 22385 | 23407 | - | LacI |
| CAZyme | MGYG000002247_20 | MGYG000002247_20_25 | 23899 | 26334 | + | GH94 |
| pfam | MGYG000002247_20 | MGYG000002247_20_26 | 26391 | 26753 | - | YgbA_NO |
| TC | MGYG000002247_20 | MGYG000002247_20_27 | 26753 | 28501 | - | 3.A.1.106.11 |
| TC | MGYG000002247_20 | MGYG000002247_20_28 | 28498 | 30333 | - | 3.A.1.106.12 |
| pfam | MGYG000002247_20 | MGYG000002247_20_29 | 30512 | 31123 | - | Fic |
| TC | MGYG000002247_20 | MGYG000002247_20_30 | 31180 | 32385 | - | 2.A.36.2.1 |
| NULL(UNKNOWN) | MGYG000002247_20 | MGYG000002247_20_31 | 32624 | 33577 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000002247_20 | MGYG000002247_20_32 | 33768 | 34757 | + | 2-Hacid_dh | 2-Hacid_dh_C |
| CAZyme | MGYG000002247_20 | MGYG000002247_20_33 | 34851 | 40424 | - | PL9_1 |
Gene ID: MGYG000002247_20_18
Type: TC
Location: 17677 - 17910 (-)
Type: TC
Location: 17677 - 17910 (-)
Gene ID: MGYG000002247_20_19
Type: pfam
Location: 18276 - 18515 (-)
Type: pfam
Location: 18276 - 18515 (-)
Gene ID: MGYG000002247_20_20
Type:
Location: 18525 - 18686 (-)
Type:
Location: 18525 - 18686 (-)
Gene ID: MGYG000002247_20_21
Type: TC
Location: 18856 - 19722 (-)
Type: TC
Location: 18856 - 19722 (-)
Gene ID: MGYG000002247_20_22
Type: TC
Location: 19738 - 20646 (-)
Type: TC
Location: 19738 - 20646 (-)
Gene ID: MGYG000002247_20_23
Type:
Location: 20870 - 22285 (-)
Type:
Location: 20870 - 22285 (-)
Gene ID: MGYG000002247_20_24
Type: TF
Location: 22385 - 23407 (-)
Type: TF
Location: 22385 - 23407 (-)
Gene ID: MGYG000002247_20_25
Type: CAZyme
Location: 23899 - 26334 (+)
Type: CAZyme
Location: 23899 - 26334 (+)
Gene ID: MGYG000002247_20_26
Type: pfam
Location: 26391 - 26753 (-)
Type: pfam
Location: 26391 - 26753 (-)
Gene ID: MGYG000002247_20_27
Type: TC
Location: 26753 - 28501 (-)
Type: TC
Location: 26753 - 28501 (-)
Gene ID: MGYG000002247_20_28
Type: TC
Location: 28498 - 30333 (-)
Type: TC
Location: 28498 - 30333 (-)
Gene ID: MGYG000002247_20_29
Type: pfam
Location: 30512 - 31123 (-)
Type: pfam
Location: 30512 - 31123 (-)
Gene ID: MGYG000002247_20_30
Type: TC
Location: 31180 - 32385 (-)
Type: TC
Location: 31180 - 32385 (-)
Gene ID: MGYG000002247_20_31
Type:
Location: 32624 - 33577 (-)
Type:
Location: 32624 - 33577 (-)
Gene ID: MGYG000002247_20_32
Type: pfam
Location: 33768 - 34757 (+)
Type: pfam
Location: 33768 - 34757 (+)
Gene ID: MGYG000002247_20_33
Type: CAZyme
Location: 34851 - 40424 (-)
Type: CAZyme
Location: 34851 - 40424 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900771995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.