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Cluster: MGYG000002247_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002247_13 MGYG000002247_13_16 25585 26595 + 3.A.1.1.20
TC MGYG000002247_13 MGYG000002247_13_17 26597 27463 + 3.A.1.1.47
pfam MGYG000002247_13 MGYG000002247_13_18 27485 28675 + GlcNAc_2-epim
CAZyme MGYG000002247_13 MGYG000002247_13_19 28756 29931 + GH130_1
CAZyme MGYG000002247_13 MGYG000002247_13_20 29955 30977 + GH130_2
CAZyme MGYG000002247_13 MGYG000002247_13_21 31028 34120 + CBM35inCE17 | CE17
pfam MGYG000002247_13 MGYG000002247_13_22 34191 35126 + PMI_typeI_cat | MPI_cupin_dom
TF MGYG000002247_13 MGYG000002247_13_23 35157 35978 - HTH_AraC | HTH_AraC
CAZyme MGYG000002247_13 MGYG000002247_13_24 36222 37373 + GH88
pfam MGYG000002247_13 MGYG000002247_13_25 37409 38290 + ROK
CAZyme MGYG000002247_13 MGYG000002247_13_26 38278 40332 + GH31_14
NULL(UNKNOWN) MGYG000002247_13 MGYG000002247_13_27 40369 41172 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000002247_13 MGYG000002247_13_28 41176 42084 + GH43_24
CAZyme MGYG000002247_13 MGYG000002247_13_29 42110 43771 + CBM91 | GH43_11
STP MGYG000002247_13 MGYG000002247_13_30 43926 45323 + SBP_bac_1
TC MGYG000002247_13 MGYG000002247_13_31 45402 46286 + 3.A.1.1.7
TC MGYG000002247_13 MGYG000002247_13_32 46286 47143 + 3.A.1.1.45
TC MGYG000002247_13 MGYG000002247_13_33 47254 49104 + 8.A.59.2.1
Gene ID: MGYG000002247_13_16
Type: TC
Location: 25585 - 26595 (+)
Gene ID: MGYG000002247_13_17
Type: TC
Location: 26597 - 27463 (+)
Gene ID: MGYG000002247_13_18
Type: pfam
Location: 27485 - 28675 (+)
Gene ID: MGYG000002247_13_19
Type: CAZyme
Location: 28756 - 29931 (+)
Gene ID: MGYG000002247_13_20
Type: CAZyme
Location: 29955 - 30977 (+)
Gene ID: MGYG000002247_13_21
Type: CAZyme
Location: 31028 - 34120 (+)
Gene ID: MGYG000002247_13_22
Type: pfam
Location: 34191 - 35126 (+)
Gene ID: MGYG000002247_13_23
Type: TF
Location: 35157 - 35978 (-)
Gene ID: MGYG000002247_13_24
Type: CAZyme
Location: 36222 - 37373 (+)
Gene ID: MGYG000002247_13_25
Type: pfam
Location: 37409 - 38290 (+)
Gene ID: MGYG000002247_13_26
Type: CAZyme
Location: 38278 - 40332 (+)
Gene ID: MGYG000002247_13_27
Type:
Location: 40369 - 41172 (+)
Gene ID: MGYG000002247_13_28
Type: CAZyme
Location: 41176 - 42084 (+)
Gene ID: MGYG000002247_13_29
Type: CAZyme
Location: 42110 - 43771 (+)
Gene ID: MGYG000002247_13_30
Type: STP
Location: 43926 - 45323 (+)
Gene ID: MGYG000002247_13_31
Type: TC
Location: 45402 - 46286 (+)
Gene ID: MGYG000002247_13_32
Type: TC
Location: 46286 - 47143 (+)
Gene ID: MGYG000002247_13_33
Type: TC
Location: 47254 - 49104 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002247_13_23 vegetarian > vegan 1.48082 0.00229
MGYG000002247_13_23 vegetarian > omnivore 2.81909 0.01057
MGYG000002247_13_24 vegetarian > vegan 1.17844 0.00229
MGYG000002247_13_26 vegetarian > vegan 1.43019 0.00229
MGYG000002247_13_29 vegetarian > vegan 1.45065 0.00229
MGYG000002247_13_30 vegetarian > vegan 1.43931 0.00229
MGYG000002247_13_31 vegetarian > vegan 1.46114 0.00229
MGYG000002247_13_32 vegetarian > vegan 1.32092 0.00229
MGYG000002247_13_33 vegetarian > vegan 2.41148 0.00229

🧭 Explore Read Mapping of CGC

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