Cluster: MGYG000002247_CGC11
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000002247
- CGC Family ID: CGCFAM_00168
- Continent: South America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002247_7 | MGYG000002247_7_4 | 5714 | 6652 | - | GT2 |
| pfam | MGYG000002247_7 | MGYG000002247_7_5 | 6849 | 8045 | - | LytR_cpsA_psr |
| TC | MGYG000002247_7 | MGYG000002247_7_6 | 8075 | 9481 | - | 9.B.18.1.1 |
| CAZyme | MGYG000002247_7 | MGYG000002247_7_7 | 9583 | 10605 | - | GT2 |
| CAZyme | MGYG000002247_7 | MGYG000002247_7_8 | 10602 | 12026 | - | GT2 |
| pfam | MGYG000002247_7 | MGYG000002247_7_9 | 12127 | 13848 | - | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | MGYG000002247_7 | MGYG000002247_7_10 | 13946 | 16012 | - | GT2 |
| CAZyme | MGYG000002247_7 | MGYG000002247_7_11 | 16063 | 18096 | - | GT2 |
| pfam | MGYG000002247_7 | MGYG000002247_7_12 | 18130 | 20202 | - | PCMT | CMAS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 |
| TC | MGYG000002247_7 | MGYG000002247_7_13 | 20206 | 21546 | - | 3.A.1.103.6 |
| pfam | MGYG000002247_7 | MGYG000002247_7_14 | 21553 | 23079 | - | DUF6056 |
| TC | MGYG000002247_7 | MGYG000002247_7_15 | 23180 | 24172 | - | 3.A.1.104.1 |
| pfam | MGYG000002247_7 | MGYG000002247_7_16 | 24159 | 24731 | - | dTDP_sugar_isom |
| CAZyme | MGYG000002247_7 | MGYG000002247_7_17 | 24762 | 26051 | - | GH25 |
| pfam | MGYG000002247_7 | MGYG000002247_7_18 | 26041 | 26910 | - | NTP_transferase | NTP_transf_3 |
| pfam | MGYG000002247_7 | MGYG000002247_7_19 | 27008 | 28090 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | MGYG000002247_7 | MGYG000002247_7_20 | 28175 | 31012 | - | GH25 |
Gene ID: MGYG000002247_7_4
Type: CAZyme
Location: 5714 - 6652 (-)
Type: CAZyme
Location: 5714 - 6652 (-)
Gene ID: MGYG000002247_7_5
Type: pfam
Location: 6849 - 8045 (-)
Type: pfam
Location: 6849 - 8045 (-)
Gene ID: MGYG000002247_7_6
Type: TC
Location: 8075 - 9481 (-)
Type: TC
Location: 8075 - 9481 (-)
Gene ID: MGYG000002247_7_7
Type: CAZyme
Location: 9583 - 10605 (-)
Type: CAZyme
Location: 9583 - 10605 (-)
Gene ID: MGYG000002247_7_8
Type: CAZyme
Location: 10602 - 12026 (-)
Type: CAZyme
Location: 10602 - 12026 (-)
Gene ID: MGYG000002247_7_9
Type: pfam
Location: 12127 - 13848 (-)
Type: pfam
Location: 12127 - 13848 (-)
Gene ID: MGYG000002247_7_10
Type: CAZyme
Location: 13946 - 16012 (-)
Type: CAZyme
Location: 13946 - 16012 (-)
Gene ID: MGYG000002247_7_11
Type: CAZyme
Location: 16063 - 18096 (-)
Type: CAZyme
Location: 16063 - 18096 (-)
Gene ID: MGYG000002247_7_12
Type: pfam
Location: 18130 - 20202 (-)
Type: pfam
Location: 18130 - 20202 (-)
Gene ID: MGYG000002247_7_13
Type: TC
Location: 20206 - 21546 (-)
Type: TC
Location: 20206 - 21546 (-)
Gene ID: MGYG000002247_7_14
Type: pfam
Location: 21553 - 23079 (-)
Type: pfam
Location: 21553 - 23079 (-)
Gene ID: MGYG000002247_7_15
Type: TC
Location: 23180 - 24172 (-)
Type: TC
Location: 23180 - 24172 (-)
Gene ID: MGYG000002247_7_16
Type: pfam
Location: 24159 - 24731 (-)
Type: pfam
Location: 24159 - 24731 (-)
Gene ID: MGYG000002247_7_17
Type: CAZyme
Location: 24762 - 26051 (-)
Type: CAZyme
Location: 24762 - 26051 (-)
Gene ID: MGYG000002247_7_18
Type: pfam
Location: 26041 - 26910 (-)
Type: pfam
Location: 26041 - 26910 (-)
Gene ID: MGYG000002247_7_19
Type: pfam
Location: 27008 - 28090 (-)
Type: pfam
Location: 27008 - 28090 (-)
Gene ID: MGYG000002247_7_20
Type: CAZyme
Location: 28175 - 31012 (-)
Type: CAZyme
Location: 28175 - 31012 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900771995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.