Cluster: MGYG000002231_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002231
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002231_42 | MGYG000002231_42_2 | 108 | 1466 | - | 2.A.33.1.1 |
| pfam | MGYG000002231_42 | MGYG000002231_42_3 | 1733 | 2656 | - | DHH | DHHA2 |
| STP | MGYG000002231_42 | MGYG000002231_42_4 | 2823 | 3776 | - | Glucokinase |
| TC | MGYG000002231_42 | MGYG000002231_42_5 | 4018 | 4350 | - | 4.A.3.2.3 |
| TC | MGYG000002231_42 | MGYG000002231_42_6 | 4360 | 4662 | - | 4.A.3.2.9 |
| TC | MGYG000002231_42 | MGYG000002231_42_7 | 4823 | 6166 | - | 4.A.3.2.9 |
| CAZyme | MGYG000002231_42 | MGYG000002231_42_8 | 6287 | 7687 | - | GH1 |
Gene ID: MGYG000002231_42_2
Type: TC
Location: 108 - 1466 (-)
Type: TC
Location: 108 - 1466 (-)
Gene ID: MGYG000002231_42_3
Type: pfam
Location: 1733 - 2656 (-)
Type: pfam
Location: 1733 - 2656 (-)
Gene ID: MGYG000002231_42_4
Type: STP
Location: 2823 - 3776 (-)
Type: STP
Location: 2823 - 3776 (-)
Gene ID: MGYG000002231_42_5
Type: TC
Location: 4018 - 4350 (-)
Type: TC
Location: 4018 - 4350 (-)
Gene ID: MGYG000002231_42_6
Type: TC
Location: 4360 - 4662 (-)
Type: TC
Location: 4360 - 4662 (-)
Gene ID: MGYG000002231_42_7
Type: TC
Location: 4823 - 6166 (-)
Type: TC
Location: 4823 - 6166 (-)
Gene ID: MGYG000002231_42_8
Type: CAZyme
Location: 6287 - 7687 (-)
Type: CAZyme
Location: 6287 - 7687 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900545615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002231_42_6 | vegan > omnivore | 1.04628 | 0.00566 |