Cluster: MGYG000002227_CGC3
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000002227
- CGC Family ID: CGCFAM_03519
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002227_1 | MGYG000002227_1_59 | 65784 | 66791 | + | GT2 |
| pfam | MGYG000002227_1 | MGYG000002227_1_60 | 66884 | 67540 | + | DUF1919 |
| pfam | MGYG000002227_1 | MGYG000002227_1_61 | 67589 | 68647 | - | PS_pyruv_trans |
| TC | MGYG000002227_1 | MGYG000002227_1_62 | 68650 | 70203 | - | 2.A.66.1.40 |
| pfam | MGYG000002227_1 | MGYG000002227_1_63 | 70208 | 71332 | - | Radical_SAM |
| CAZyme | MGYG000002227_1 | MGYG000002227_1_64 | 71349 | 72305 | - | GT2 |
| CAZyme | MGYG000002227_1 | MGYG000002227_1_65 | 72314 | 73318 | - | GT2 |
| CAZyme | MGYG000002227_1 | MGYG000002227_1_66 | 73308 | 74207 | - | GT14 |
| CAZyme | MGYG000002227_1 | MGYG000002227_1_67 | 74235 | 75167 | - | GT2 |
| pfam | MGYG000002227_1 | MGYG000002227_1_68 | 75243 | 76445 | - | EpsG |
| CAZyme | MGYG000002227_1 | MGYG000002227_1_69 | 76463 | 77581 | - | GT4 |
| pfam | MGYG000002227_1 | MGYG000002227_1_70 | 77615 | 78544 | - | DUF6625 |
| CAZyme | MGYG000002227_1 | MGYG000002227_1_71 | 78561 | 79640 | - | GT4 |
| CAZyme | MGYG000002227_1 | MGYG000002227_1_72 | 79637 | 80773 | - | GT4 |
| TC | MGYG000002227_1 | MGYG000002227_1_73 | 80783 | 81421 | - | 9.B.18.1.3 |
Gene ID: MGYG000002227_1_59
Type: CAZyme
Location: 65784 - 66791 (+)
Type: CAZyme
Location: 65784 - 66791 (+)
Gene ID: MGYG000002227_1_60
Type: pfam
Location: 66884 - 67540 (+)
Type: pfam
Location: 66884 - 67540 (+)
Gene ID: MGYG000002227_1_61
Type: pfam
Location: 67589 - 68647 (-)
Type: pfam
Location: 67589 - 68647 (-)
Gene ID: MGYG000002227_1_62
Type: TC
Location: 68650 - 70203 (-)
Type: TC
Location: 68650 - 70203 (-)
Gene ID: MGYG000002227_1_63
Type: pfam
Location: 70208 - 71332 (-)
Type: pfam
Location: 70208 - 71332 (-)
Gene ID: MGYG000002227_1_64
Type: CAZyme
Location: 71349 - 72305 (-)
Type: CAZyme
Location: 71349 - 72305 (-)
Gene ID: MGYG000002227_1_65
Type: CAZyme
Location: 72314 - 73318 (-)
Type: CAZyme
Location: 72314 - 73318 (-)
Gene ID: MGYG000002227_1_66
Type: CAZyme
Location: 73308 - 74207 (-)
Type: CAZyme
Location: 73308 - 74207 (-)
Gene ID: MGYG000002227_1_67
Type: CAZyme
Location: 74235 - 75167 (-)
Type: CAZyme
Location: 74235 - 75167 (-)
Gene ID: MGYG000002227_1_68
Type: pfam
Location: 75243 - 76445 (-)
Type: pfam
Location: 75243 - 76445 (-)
Gene ID: MGYG000002227_1_69
Type: CAZyme
Location: 76463 - 77581 (-)
Type: CAZyme
Location: 76463 - 77581 (-)
Gene ID: MGYG000002227_1_70
Type: pfam
Location: 77615 - 78544 (-)
Type: pfam
Location: 77615 - 78544 (-)
Gene ID: MGYG000002227_1_71
Type: CAZyme
Location: 78561 - 79640 (-)
Type: CAZyme
Location: 78561 - 79640 (-)
Gene ID: MGYG000002227_1_72
Type: CAZyme
Location: 79637 - 80773 (-)
Type: CAZyme
Location: 79637 - 80773 (-)
Gene ID: MGYG000002227_1_73
Type: TC
Location: 80783 - 81421 (-)
Type: TC
Location: 80783 - 81421 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.