Cluster: MGYG000002216_CGC34
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate: arabinogalactan
- Genome ID: MGYG000002216
- CGC Family ID: CGCFAM_04142
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002216_49 | MGYG000002216_49_2 | 892 | 2655 | - | 3.A.1.117.3 |
| CAZyme | MGYG000002216_49 | MGYG000002216_49_3 | 2940 | 6980 | + | GH43_27 |
| CAZyme | MGYG000002216_49 | MGYG000002216_49_4 | 7415 | 15598 | + | GH43_22 | GH43_26 |
| CAZyme | MGYG000002216_49 | MGYG000002216_49_5 | 15765 | 20777 | + | GH43_22 | GH43_34 |
Gene ID: MGYG000002216_49_2
Type: TC
Location: 892 - 2655 (-)
Type: TC
Location: 892 - 2655 (-)
Gene ID: MGYG000002216_49_3
Type: CAZyme
Location: 2940 - 6980 (+)
Type: CAZyme
Location: 2940 - 6980 (+)
Gene ID: MGYG000002216_49_4
Type: CAZyme
Location: 7415 - 15598 (+)
Type: CAZyme
Location: 7415 - 15598 (+)
Gene ID: MGYG000002216_49_5
Type: CAZyme
Location: 15765 - 20777 (+)
Type: CAZyme
Location: 15765 - 20777 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CABSEG01
Species
CABSEG01 sp902476645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.