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Cluster: MGYG000002216_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002216_24 MGYG000002216_24_3 2045 3916 + 3.A.1.2.14
CAZyme MGYG000002216_24 MGYG000002216_24_4 4076 10270 + CBM66 | CBM66 | GH127
CAZyme MGYG000002216_24 MGYG000002216_24_5 10449 16775 + CBM66 | CBM66 | GH2
STP MGYG000002216_24 MGYG000002216_24_6 16971 18110 + Fer4
CAZyme MGYG000002216_24 MGYG000002216_24_7 18275 21379 + CBM35 | GH43_26
TC MGYG000002216_24 MGYG000002216_24_8 21598 23220 + 2.A.35.2.1
pfam MGYG000002216_24 MGYG000002216_24_9 23277 23924 + Flavin_Reduct | RUBY_RBDX
pfam MGYG000002216_24 MGYG000002216_24_10 24003 24776 + H2O2_YaaD
TC MGYG000002216_24 MGYG000002216_24_11 24847 25689 + 2.A.119.2.1
pfam MGYG000002216_24 MGYG000002216_24_12 25776 26429 + RelA_SpoT
TC MGYG000002216_24 MGYG000002216_24_13 26570 28312 + 2.A.58.2.2
STP MGYG000002216_24 MGYG000002216_24_14 28498 29760 + SBP_bac_1
TC MGYG000002216_24 MGYG000002216_24_15 29770 31536 + 8.A.59.2.1
TF MGYG000002216_24 MGYG000002216_24_16 31511 32221 + HTH_AraC
CAZyme MGYG000002216_24 MGYG000002216_24_17 32395 33531 + GH2
Gene ID: MGYG000002216_24_3
Type: TC
Location: 2045 - 3916 (+)
Gene ID: MGYG000002216_24_4
Type: CAZyme
Location: 4076 - 10270 (+)
Gene ID: MGYG000002216_24_5
Type: CAZyme
Location: 10449 - 16775 (+)
Gene ID: MGYG000002216_24_6
Type: STP
Location: 16971 - 18110 (+)
Gene ID: MGYG000002216_24_7
Type: CAZyme
Location: 18275 - 21379 (+)
Gene ID: MGYG000002216_24_8
Type: TC
Location: 21598 - 23220 (+)
Gene ID: MGYG000002216_24_9
Type: pfam
Location: 23277 - 23924 (+)
Gene ID: MGYG000002216_24_10
Type: pfam
Location: 24003 - 24776 (+)
Gene ID: MGYG000002216_24_11
Type: TC
Location: 24847 - 25689 (+)
Gene ID: MGYG000002216_24_12
Type: pfam
Location: 25776 - 26429 (+)
Gene ID: MGYG000002216_24_13
Type: TC
Location: 26570 - 28312 (+)
Gene ID: MGYG000002216_24_14
Type: STP
Location: 28498 - 29760 (+)
Gene ID: MGYG000002216_24_15
Type: TC
Location: 29770 - 31536 (+)
Gene ID: MGYG000002216_24_16
Type: TF
Location: 31511 - 32221 (+)
Gene ID: MGYG000002216_24_17
Type: CAZyme
Location: 32395 - 33531 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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