Cluster: MGYG000002216_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002216
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002216_20 | MGYG000002216_20_15 | 21025 | 23709 | - | 3.A.3.2.21 |
| CAZyme | MGYG000002216_20 | MGYG000002216_20_16 | 23907 | 28001 | - | GH3 |
| TF | MGYG000002216_20 | MGYG000002216_20_17 | 28246 | 28962 | + | LytTR |
| STP | MGYG000002216_20 | MGYG000002216_20_18 | 28959 | 30269 | + | HATPase_c |
| CAZyme | MGYG000002216_20 | MGYG000002216_20_19 | 30389 | 36580 | - | CBM51 | CBM51 | GH2 |
| CAZyme | MGYG000002216_20 | MGYG000002216_20_20 | 36819 | 39554 | - | CBM32 | CBM51 |
Gene ID: MGYG000002216_20_15
Type: TC
Location: 21025 - 23709 (-)
Type: TC
Location: 21025 - 23709 (-)
Gene ID: MGYG000002216_20_16
Type: CAZyme
Location: 23907 - 28001 (-)
Type: CAZyme
Location: 23907 - 28001 (-)
Gene ID: MGYG000002216_20_17
Type: TF
Location: 28246 - 28962 (+)
Type: TF
Location: 28246 - 28962 (+)
Gene ID: MGYG000002216_20_18
Type: STP
Location: 28959 - 30269 (+)
Type: STP
Location: 28959 - 30269 (+)
Gene ID: MGYG000002216_20_19
Type: CAZyme
Location: 30389 - 36580 (-)
Type: CAZyme
Location: 30389 - 36580 (-)
Gene ID: MGYG000002216_20_20
Type: CAZyme
Location: 36819 - 39554 (-)
Type: CAZyme
Location: 36819 - 39554 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CABSEG01
Species
CABSEG01 sp902476645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.