Cluster: MGYG000002216_CGC2
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000002216
- CGC Family ID: CGCFAM_00168
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002216_2 | MGYG000002216_2_32 | 32107 | 33030 | - | GT2 |
| pfam | MGYG000002216_2 | MGYG000002216_2_33 | 33033 | 34304 | - | LytR_cpsA_psr |
| TC | MGYG000002216_2 | MGYG000002216_2_34 | 34320 | 35726 | - | 9.B.18.1.1 |
| CAZyme | MGYG000002216_2 | MGYG000002216_2_35 | 35809 | 36768 | - | GT2 |
| STP | MGYG000002216_2 | MGYG000002216_2_36 | 36794 | 37927 | - | Aminotran_1_2 |
| pfam | MGYG000002216_2 | MGYG000002216_2_37 | 37933 | 38790 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | MGYG000002216_2 | MGYG000002216_2_38 | 38807 | 40612 | - | GT2 | GT2 |
| pfam | MGYG000002216_2 | MGYG000002216_2_39 | 40609 | 43278 | - | YfhO |
| CAZyme | MGYG000002216_2 | MGYG000002216_2_40 | 43296 | 45725 | - | GT2 | GT2 |
| CAZyme | MGYG000002216_2 | MGYG000002216_2_41 | 45722 | 47806 | - | GT2 | GT2 |
| pfam | MGYG000002216_2 | MGYG000002216_2_42 | 47811 | 49991 | - | MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | MGYG000002216_2 | MGYG000002216_2_43 | 49994 | 51268 | - | 3.A.1.103.6 |
| TC | MGYG000002216_2 | MGYG000002216_2_44 | 51283 | 52098 | - | 3.A.1.104.1 |
Gene ID: MGYG000002216_2_32
Type: CAZyme
Location: 32107 - 33030 (-)
Type: CAZyme
Location: 32107 - 33030 (-)
Gene ID: MGYG000002216_2_33
Type: pfam
Location: 33033 - 34304 (-)
Type: pfam
Location: 33033 - 34304 (-)
Gene ID: MGYG000002216_2_34
Type: TC
Location: 34320 - 35726 (-)
Type: TC
Location: 34320 - 35726 (-)
Gene ID: MGYG000002216_2_35
Type: CAZyme
Location: 35809 - 36768 (-)
Type: CAZyme
Location: 35809 - 36768 (-)
Gene ID: MGYG000002216_2_36
Type: STP
Location: 36794 - 37927 (-)
Type: STP
Location: 36794 - 37927 (-)
Gene ID: MGYG000002216_2_37
Type: pfam
Location: 37933 - 38790 (-)
Type: pfam
Location: 37933 - 38790 (-)
Gene ID: MGYG000002216_2_38
Type: CAZyme
Location: 38807 - 40612 (-)
Type: CAZyme
Location: 38807 - 40612 (-)
Gene ID: MGYG000002216_2_39
Type: pfam
Location: 40609 - 43278 (-)
Type: pfam
Location: 40609 - 43278 (-)
Gene ID: MGYG000002216_2_40
Type: CAZyme
Location: 43296 - 45725 (-)
Type: CAZyme
Location: 43296 - 45725 (-)
Gene ID: MGYG000002216_2_41
Type: CAZyme
Location: 45722 - 47806 (-)
Type: CAZyme
Location: 45722 - 47806 (-)
Gene ID: MGYG000002216_2_42
Type: pfam
Location: 47811 - 49991 (-)
Type: pfam
Location: 47811 - 49991 (-)
Gene ID: MGYG000002216_2_43
Type: TC
Location: 49994 - 51268 (-)
Type: TC
Location: 49994 - 51268 (-)
Gene ID: MGYG000002216_2_44
Type: TC
Location: 51283 - 52098 (-)
Type: TC
Location: 51283 - 52098 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CABSEG01
Species
CABSEG01 sp902476645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.