Cluster: MGYG000002216_CGC17
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002216
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002216_10 | MGYG000002216_10_5 | 4191 | 5102 | - | GH25 |
| CAZyme | MGYG000002216_10 | MGYG000002216_10_6 | 5300 | 10030 | - | CE1 | GH3 |
| NULL(UNKNOWN) | MGYG000002216_10 | MGYG000002216_10_7 | 10282 | 11115 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000002216_10 | MGYG000002216_10_8 | 11143 | 12210 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002216_10 | MGYG000002216_10_9 | 12248 | 15628 | - | GH3 |
| TC | MGYG000002216_10 | MGYG000002216_10_10 | 15765 | 16793 | - | 3.A.1.2.15 |
| pfam | MGYG000002216_10 | MGYG000002216_10_11 | 16804 | 17697 | - | Peripla_BP_4 |
| TC | MGYG000002216_10 | MGYG000002216_10_12 | 17700 | 19466 | - | 8.A.59.2.1 |
| TF | MGYG000002216_10 | MGYG000002216_10_13 | 19484 | 21097 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000002216_10 | MGYG000002216_10_14 | 21408 | 25421 | - | GH3 |
Gene ID: MGYG000002216_10_5
Type: CAZyme
Location: 4191 - 5102 (-)
Type: CAZyme
Location: 4191 - 5102 (-)
Gene ID: MGYG000002216_10_6
Type: CAZyme
Location: 5300 - 10030 (-)
Type: CAZyme
Location: 5300 - 10030 (-)
Gene ID: MGYG000002216_10_7
Type:
Location: 10282 - 11115 (-)
Type:
Location: 10282 - 11115 (-)
Gene ID: MGYG000002216_10_8
Type:
Location: 11143 - 12210 (-)
Type:
Location: 11143 - 12210 (-)
Gene ID: MGYG000002216_10_9
Type: CAZyme
Location: 12248 - 15628 (-)
Type: CAZyme
Location: 12248 - 15628 (-)
Gene ID: MGYG000002216_10_10
Type: TC
Location: 15765 - 16793 (-)
Type: TC
Location: 15765 - 16793 (-)
Gene ID: MGYG000002216_10_11
Type: pfam
Location: 16804 - 17697 (-)
Type: pfam
Location: 16804 - 17697 (-)
Gene ID: MGYG000002216_10_12
Type: TC
Location: 17700 - 19466 (-)
Type: TC
Location: 17700 - 19466 (-)
Gene ID: MGYG000002216_10_13
Type: TF
Location: 19484 - 21097 (-)
Type: TF
Location: 19484 - 21097 (-)
Gene ID: MGYG000002216_10_14
Type: CAZyme
Location: 21408 - 25421 (-)
Type: CAZyme
Location: 21408 - 25421 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CABSEG01
Species
CABSEG01 sp902476645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.