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Cluster: MGYG000002215_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002215_3 MGYG000002215_3_17 17270 18157 + 3.A.1.1.18
TC MGYG000002215_3 MGYG000002215_3_18 18168 18995 + 3.A.1.1.18
CAZyme MGYG000002215_3 MGYG000002215_3_19 19013 20029 + GH130
STP MGYG000002215_3 MGYG000002215_3_20 20047 21804 + HATPase_c | dCache_1
TF MGYG000002215_3 MGYG000002215_3_21 21779 22618 + HTH_AraC | HTH_AraC
CAZyme MGYG000002215_3 MGYG000002215_3_22 22624 24576 + GH127
pfam MGYG000002215_3 MGYG000002215_3_23 24736 25623 + DUF1002
pfam MGYG000002215_3 MGYG000002215_3_24 25749 26426 - RelA_SpoT
TC MGYG000002215_3 MGYG000002215_3_25 26578 27636 - 9.A.23.1.1
Gene ID: MGYG000002215_3_17
Type: TC
Location: 17270 - 18157 (+)
Gene ID: MGYG000002215_3_18
Type: TC
Location: 18168 - 18995 (+)
Gene ID: MGYG000002215_3_19
Type: CAZyme
Location: 19013 - 20029 (+)
Gene ID: MGYG000002215_3_20
Type: STP
Location: 20047 - 21804 (+)
Gene ID: MGYG000002215_3_21
Type: TF
Location: 21779 - 22618 (+)
Gene ID: MGYG000002215_3_22
Type: CAZyme
Location: 22624 - 24576 (+)
Gene ID: MGYG000002215_3_23
Type: pfam
Location: 24736 - 25623 (+)
Gene ID: MGYG000002215_3_24
Type: pfam
Location: 25749 - 26426 (-)
Gene ID: MGYG000002215_3_25
Type: TC
Location: 26578 - 27636 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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