Cluster: MGYG000002198_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002198
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002198_39 | MGYG000002198_39_5 | 4825 | 7593 | - | 3.A.3.4.1 |
| STP | MGYG000002198_39 | MGYG000002198_39_6 | 8034 | 8717 | + | Pribosyltran |
| TF | MGYG000002198_39 | MGYG000002198_39_7 | 8923 | 9777 | - | HTH_6 |
| CAZyme | MGYG000002198_39 | MGYG000002198_39_8 | 9820 | 12390 | - | GH106 |
| TF | MGYG000002198_39 | MGYG000002198_39_9 | 12609 | 13616 | + | HTH_AraC |
| CAZyme | MGYG000002198_39 | MGYG000002198_39_10 | 13789 | 15237 | + | GH1 |
| TC | MGYG000002198_39 | MGYG000002198_39_11 | 15378 | 15914 | + | 4.A.1.2.6 |
Gene ID: MGYG000002198_39_5
Type: TC
Location: 4825 - 7593 (-)
Type: TC
Location: 4825 - 7593 (-)
Gene ID: MGYG000002198_39_6
Type: STP
Location: 8034 - 8717 (+)
Type: STP
Location: 8034 - 8717 (+)
Gene ID: MGYG000002198_39_7
Type: TF
Location: 8923 - 9777 (-)
Type: TF
Location: 8923 - 9777 (-)
Gene ID: MGYG000002198_39_8
Type: CAZyme
Location: 9820 - 12390 (-)
Type: CAZyme
Location: 9820 - 12390 (-)
Gene ID: MGYG000002198_39_9
Type: TF
Location: 12609 - 13616 (+)
Type: TF
Location: 12609 - 13616 (+)
Gene ID: MGYG000002198_39_10
Type: CAZyme
Location: 13789 - 15237 (+)
Type: CAZyme
Location: 13789 - 15237 (+)
Gene ID: MGYG000002198_39_11
Type: TC
Location: 15378 - 15914 (+)
Type: TC
Location: 15378 - 15914 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902476475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.