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Cluster: MGYG000002198_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002198_37 MGYG000002198_37_6 4948 5286 - 4.A.3.1.2
TF MGYG000002198_37 MGYG000002198_37_7 5501 6505 - LacI
TC MGYG000002198_37 MGYG000002198_37_8 6863 8632 + 4.A.3.1.1
CAZyme MGYG000002198_37 MGYG000002198_37_9 8699 10138 + GH1
TF MGYG000002198_37 MGYG000002198_37_10 10409 11446 - LacI
CAZyme MGYG000002198_37 MGYG000002198_37_11 11788 13230 + GH1
TC MGYG000002198_37 MGYG000002198_37_12 13407 15167 + 4.A.3.1.1
TF MGYG000002198_37 MGYG000002198_37_13 15580 16590 - LacI
TC MGYG000002198_37 MGYG000002198_37_14 16866 18251 + 4.A.3.1.1
Gene ID: MGYG000002198_37_6
Type: TC
Location: 4948 - 5286 (-)
Gene ID: MGYG000002198_37_7
Type: TF
Location: 5501 - 6505 (-)
Gene ID: MGYG000002198_37_8
Type: TC
Location: 6863 - 8632 (+)
Gene ID: MGYG000002198_37_9
Type: CAZyme
Location: 8699 - 10138 (+)
Gene ID: MGYG000002198_37_10
Type: TF
Location: 10409 - 11446 (-)
Gene ID: MGYG000002198_37_11
Type: CAZyme
Location: 11788 - 13230 (+)
Gene ID: MGYG000002198_37_12
Type: TC
Location: 13407 - 15167 (+)
Gene ID: MGYG000002198_37_13
Type: TF
Location: 15580 - 16590 (-)
Gene ID: MGYG000002198_37_14
Type: TC
Location: 16866 - 18251 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002198_37_10 vegetarian > omnivore 1.08327 0.01548

🧭 Explore Read Mapping of CGC

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