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Cluster: MGYG000002195_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002195_36 MGYG000002195_36_5 5844 7403 - 2.A.35.2.1
TC MGYG000002195_36 MGYG000002195_36_6 7538 9610 - 3.A.23.1.1
CAZyme MGYG000002195_36 MGYG000002195_36_7 9576 10526 - CE4
CAZyme MGYG000002195_36 MGYG000002195_36_8 10528 11385 - CE4
pfam MGYG000002195_36 MGYG000002195_36_9 11638 12651 + WG_beta_rep | WG_beta_rep | WG_beta_rep
NULL(UNKNOWN) MGYG000002195_36 MGYG000002195_36_10 12652 13368 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000002195_36 MGYG000002195_36_11 13316 15379 - 3.A.23.1.1
STP MGYG000002195_36 MGYG000002195_36_12 15397 16149 - Nitroreductase
TC MGYG000002195_36 MGYG000002195_36_13 16499 17923 + 2.A.35.1.1
Gene ID: MGYG000002195_36_5
Type: TC
Location: 5844 - 7403 (-)
Gene ID: MGYG000002195_36_6
Type: TC
Location: 7538 - 9610 (-)
Gene ID: MGYG000002195_36_7
Type: CAZyme
Location: 9576 - 10526 (-)
Gene ID: MGYG000002195_36_8
Type: CAZyme
Location: 10528 - 11385 (-)
Gene ID: MGYG000002195_36_9
Type: pfam
Location: 11638 - 12651 (+)
Gene ID: MGYG000002195_36_10
Type:
Location: 12652 - 13368 (+)
Gene ID: MGYG000002195_36_11
Type: TC
Location: 13316 - 15379 (-)
Gene ID: MGYG000002195_36_12
Type: STP
Location: 15397 - 16149 (-)
Gene ID: MGYG000002195_36_13
Type: TC
Location: 16499 - 17923 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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