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Cluster: MGYG000002187_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002187_43 MGYG000002187_43_5 3984 4322 - 4.A.3.1.2
TF MGYG000002187_43 MGYG000002187_43_6 4537 5541 - LacI
TC MGYG000002187_43 MGYG000002187_43_7 5899 7674 + 4.A.3.1.1
CAZyme MGYG000002187_43 MGYG000002187_43_8 7741 9180 + GH1
TF MGYG000002187_43 MGYG000002187_43_9 9448 10485 - LacI
CAZyme MGYG000002187_43 MGYG000002187_43_10 10827 12269 + GH1
TC MGYG000002187_43 MGYG000002187_43_11 12446 14206 + 4.A.3.1.1
TF MGYG000002187_43 MGYG000002187_43_12 14621 15631 - LacI
TC MGYG000002187_43 MGYG000002187_43_13 15907 17193 + 4.A.3.1.1
Gene ID: MGYG000002187_43_5
Type: TC
Location: 3984 - 4322 (-)
Gene ID: MGYG000002187_43_6
Type: TF
Location: 4537 - 5541 (-)
Gene ID: MGYG000002187_43_7
Type: TC
Location: 5899 - 7674 (+)
Gene ID: MGYG000002187_43_8
Type: CAZyme
Location: 7741 - 9180 (+)
Gene ID: MGYG000002187_43_9
Type: TF
Location: 9448 - 10485 (-)
Gene ID: MGYG000002187_43_10
Type: CAZyme
Location: 10827 - 12269 (+)
Gene ID: MGYG000002187_43_11
Type: TC
Location: 12446 - 14206 (+)
Gene ID: MGYG000002187_43_12
Type: TF
Location: 14621 - 15631 (-)
Gene ID: MGYG000002187_43_13
Type: TC
Location: 15907 - 17193 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002187_43_9 vegetarian > omnivore 1.05153 0.02242

🧭 Explore Read Mapping of CGC

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