Cluster: MGYG000002168_CGC25
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000002168
- CGC Family ID: CGCFAM_09700
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002168_19 | MGYG000002168_19_17 | 15517 | 16812 | - | 2.A.40.7.6 |
| CAZyme | MGYG000002168_19 | MGYG000002168_19_18 | 16890 | 19235 | - | GH35 |
| pfam | MGYG000002168_19 | MGYG000002168_19_19 | 19279 | 20274 | - | UPF0227 |
| CAZyme | MGYG000002168_19 | MGYG000002168_19_20 | 20292 | 22862 | - | GH2 |
| NULL(UNKNOWN) | MGYG000002168_19 | MGYG000002168_19_21 | 23496 | 23657 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002168_19 | MGYG000002168_19_22 | 23654 | 26056 | - | GH2 |
| CAZyme | MGYG000002168_19 | MGYG000002168_19_23 | 26088 | 28391 | - | GH88 | PL38 |
| NULL(UNKNOWN) | MGYG000002168_19 | MGYG000002168_19_24 | 28426 | 28986 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000002168_19 | MGYG000002168_19_25 | 29003 | 30652 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000002168_19 | MGYG000002168_19_26 | 30666 | 33881 | - | 1.B.14.6.1 |
| STP | MGYG000002168_19 | MGYG000002168_19_27 | 34133 | 37000 | + | Y_Y_Y |
| CAZyme | MGYG000002168_19 | MGYG000002168_19_28 | 37157 | 40366 | + | GH2 |
| CAZyme | MGYG000002168_19 | MGYG000002168_19_29 | 40463 | 42388 | + | GH51_2 |
| CAZyme | MGYG000002168_19 | MGYG000002168_19_30 | 42440 | 44404 | - | GH20 |
Gene ID: MGYG000002168_19_17
Type: TC
Location: 15517 - 16812 (-)
Type: TC
Location: 15517 - 16812 (-)
Gene ID: MGYG000002168_19_18
Type: CAZyme
Location: 16890 - 19235 (-)
Type: CAZyme
Location: 16890 - 19235 (-)
Gene ID: MGYG000002168_19_19
Type: pfam
Location: 19279 - 20274 (-)
Type: pfam
Location: 19279 - 20274 (-)
Gene ID: MGYG000002168_19_20
Type: CAZyme
Location: 20292 - 22862 (-)
Type: CAZyme
Location: 20292 - 22862 (-)
Gene ID: MGYG000002168_19_21
Type:
Location: 23496 - 23657 (-)
Type:
Location: 23496 - 23657 (-)
Gene ID: MGYG000002168_19_22
Type: CAZyme
Location: 23654 - 26056 (-)
Type: CAZyme
Location: 23654 - 26056 (-)
Gene ID: MGYG000002168_19_23
Type: CAZyme
Location: 26088 - 28391 (-)
Type: CAZyme
Location: 26088 - 28391 (-)
Gene ID: MGYG000002168_19_24
Type:
Location: 28426 - 28986 (-)
Type:
Location: 28426 - 28986 (-)
Gene ID: MGYG000002168_19_25
Type: pfam
Location: 29003 - 30652 (-)
Type: pfam
Location: 29003 - 30652 (-)
Gene ID: MGYG000002168_19_26
Type: TC
Location: 30666 - 33881 (-)
Type: TC
Location: 30666 - 33881 (-)
Gene ID: MGYG000002168_19_27
Type: STP
Location: 34133 - 37000 (+)
Type: STP
Location: 34133 - 37000 (+)
Gene ID: MGYG000002168_19_28
Type: CAZyme
Location: 37157 - 40366 (+)
Type: CAZyme
Location: 37157 - 40366 (+)
Gene ID: MGYG000002168_19_29
Type: CAZyme
Location: 40463 - 42388 (+)
Type: CAZyme
Location: 40463 - 42388 (+)
Gene ID: MGYG000002168_19_30
Type: CAZyme
Location: 42440 - 44404 (-)
Type: CAZyme
Location: 42440 - 44404 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900556825
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.