Cluster: MGYG000002168_CGC2
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002168
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002168_3 | MGYG000002168_3_14 | 13605 | 14813 | + | 2.A.23.2.1 |
| pfam | MGYG000002168_3 | MGYG000002168_3_15 | 14810 | 15340 | - | Lysine_decarbox | LDcluster4 |
| TC | MGYG000002168_3 | MGYG000002168_3_16 | 15468 | 17351 | + | 3.A.18.1.1 |
| peptidase | MGYG000002168_3 | MGYG000002168_3_17 | 17368 | 19875 | + | M01.UPW |
| CAZyme | MGYG000002168_3 | MGYG000002168_3_18 | 19896 | 21494 | - | GH27 |
| pfam | MGYG000002168_3 | MGYG000002168_3_19 | 21778 | 22344 | + | AhpC-TSA | SCO1-SenC | Redoxin | 1-cysPrx_C |
| STP | MGYG000002168_3 | MGYG000002168_3_20 | 22349 | 23899 | + | Pyr_redox_2 |
| CAZyme | MGYG000002168_3 | MGYG000002168_3_21 | 23998 | 28959 | - | CBM32 |
| CAZyme | MGYG000002168_3 | MGYG000002168_3_22 | 29263 | 31725 | - | GH2 |
| CAZyme | MGYG000002168_3 | MGYG000002168_3_23 | 31779 | 33404 | - | CBM91 | GH43_10 |
| pfam | MGYG000002168_3 | MGYG000002168_3_24 | 33474 | 35102 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000002168_3 | MGYG000002168_3_25 | 35124 | 38420 | - | 1.B.14.6.1 |
Gene ID: MGYG000002168_3_14
Type: TC
Location: 13605 - 14813 (+)
Type: TC
Location: 13605 - 14813 (+)
Gene ID: MGYG000002168_3_15
Type: pfam
Location: 14810 - 15340 (-)
Type: pfam
Location: 14810 - 15340 (-)
Gene ID: MGYG000002168_3_16
Type: TC
Location: 15468 - 17351 (+)
Type: TC
Location: 15468 - 17351 (+)
Gene ID: MGYG000002168_3_17
Type: peptidase
Location: 17368 - 19875 (+)
Type: peptidase
Location: 17368 - 19875 (+)
Gene ID: MGYG000002168_3_18
Type: CAZyme
Location: 19896 - 21494 (-)
Type: CAZyme
Location: 19896 - 21494 (-)
Gene ID: MGYG000002168_3_19
Type: pfam
Location: 21778 - 22344 (+)
Type: pfam
Location: 21778 - 22344 (+)
Gene ID: MGYG000002168_3_20
Type: STP
Location: 22349 - 23899 (+)
Type: STP
Location: 22349 - 23899 (+)
Gene ID: MGYG000002168_3_21
Type: CAZyme
Location: 23998 - 28959 (-)
Type: CAZyme
Location: 23998 - 28959 (-)
Gene ID: MGYG000002168_3_22
Type: CAZyme
Location: 29263 - 31725 (-)
Type: CAZyme
Location: 29263 - 31725 (-)
Gene ID: MGYG000002168_3_23
Type: CAZyme
Location: 31779 - 33404 (-)
Type: CAZyme
Location: 31779 - 33404 (-)
Gene ID: MGYG000002168_3_24
Type: pfam
Location: 33474 - 35102 (-)
Type: pfam
Location: 33474 - 35102 (-)
Gene ID: MGYG000002168_3_25
Type: TC
Location: 35124 - 38420 (-)
Type: TC
Location: 35124 - 38420 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900556825
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.