Cluster: MGYG000002156_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002156
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002156_19 | MGYG000002156_19_4 | 2579 | 4417 | - | GH13_39 |
| pfam | MGYG000002156_19 | MGYG000002156_19_5 | 4429 | 6462 | - | Transpeptidase | PBP_dimer | PBP_dimer |
| NULL(UNKNOWN) | MGYG000002156_19 | MGYG000002156_19_6 | 6479 | 6988 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002156_19 | MGYG000002156_19_7 | 7008 | 7847 | - | 9.B.157.1.2 |
Gene ID: MGYG000002156_19_4
Type: CAZyme
Location: 2579 - 4417 (-)
Type: CAZyme
Location: 2579 - 4417 (-)
Gene ID: MGYG000002156_19_5
Type: pfam
Location: 4429 - 6462 (-)
Type: pfam
Location: 4429 - 6462 (-)
Gene ID: MGYG000002156_19_6
Type:
Location: 6479 - 6988 (-)
Type:
Location: 6479 - 6988 (-)
Gene ID: MGYG000002156_19_7
Type: TC
Location: 7008 - 7847 (-)
Type: TC
Location: 7008 - 7847 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900550585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002156_19_6 | vegetarian > omnivore | 3.36097 | 0.00557 |
| MGYG000002156_19_7 | vegetarian > omnivore | 1.77065 | 0.00557 |