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Cluster: MGYG000002154_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002154_41 MGYG000002154_41_5 1958 3037 + 3.A.7.19.1
TF MGYG000002154_41 MGYG000002154_41_6 3219 4256 + LacI
CAZyme MGYG000002154_41 MGYG000002154_41_7 4265 5950 + CBM34 | GH13_20
TC MGYG000002154_41 MGYG000002154_41_8 6047 7345 + 3.A.1.1.22
TC MGYG000002154_41 MGYG000002154_41_9 7423 8733 + 3.A.1.1.6
TC MGYG000002154_41 MGYG000002154_41_10 8730 9602 + 3.A.1.1.6
CAZyme MGYG000002154_41 MGYG000002154_41_11 9604 11520 + GH31_15
pfam MGYG000002154_41 MGYG000002154_41_12 11588 12205 + Alpha-amylase
CAZyme MGYG000002154_41 MGYG000002154_41_13 12212 13795 + CBM20 | GH13_2
Gene ID: MGYG000002154_41_5
Type: TC
Location: 1958 - 3037 (+)
Gene ID: MGYG000002154_41_6
Type: TF
Location: 3219 - 4256 (+)
Gene ID: MGYG000002154_41_7
Type: CAZyme
Location: 4265 - 5950 (+)
Gene ID: MGYG000002154_41_8
Type: TC
Location: 6047 - 7345 (+)
Gene ID: MGYG000002154_41_9
Type: TC
Location: 7423 - 8733 (+)
Gene ID: MGYG000002154_41_10
Type: TC
Location: 8730 - 9602 (+)
Gene ID: MGYG000002154_41_11
Type: CAZyme
Location: 9604 - 11520 (+)
Gene ID: MGYG000002154_41_12
Type: pfam
Location: 11588 - 12205 (+)
Gene ID: MGYG000002154_41_13
Type: CAZyme
Location: 12212 - 13795 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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