Cluster: MGYG000002148_CGC90
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002148
- CGC Family ID: CGCFAM_00653
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002148_63 | MGYG000002148_63_8 | 7655 | 8608 | + | 3.A.1.1.10 |
| TC | MGYG000002148_63 | MGYG000002148_63_9 | 8619 | 9488 | + | 3.A.1.1.29 |
| pfam | MGYG000002148_63 | MGYG000002148_63_10 | 9499 | 10161 | + | ThuA |
| CAZyme | MGYG000002148_63 | MGYG000002148_63_11 | 10139 | 12634 | + | GH2 |
| NULL(UNKNOWN) | MGYG000002148_63 | MGYG000002148_63_12 | 12702 | 13406 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000002148_63 | MGYG000002148_63_13 | 13931 | 14956 | + | LacI |
| CAZyme | MGYG000002148_63 | MGYG000002148_63_14 | 14953 | 16788 | + | GH13_20 |
Gene ID: MGYG000002148_63_8
Type: TC
Location: 7655 - 8608 (+)
Type: TC
Location: 7655 - 8608 (+)
Gene ID: MGYG000002148_63_9
Type: TC
Location: 8619 - 9488 (+)
Type: TC
Location: 8619 - 9488 (+)
Gene ID: MGYG000002148_63_10
Type: pfam
Location: 9499 - 10161 (+)
Type: pfam
Location: 9499 - 10161 (+)
Gene ID: MGYG000002148_63_11
Type: CAZyme
Location: 10139 - 12634 (+)
Type: CAZyme
Location: 10139 - 12634 (+)
Gene ID: MGYG000002148_63_12
Type:
Location: 12702 - 13406 (-)
Type:
Location: 12702 - 13406 (-)
Gene ID: MGYG000002148_63_13
Type: TF
Location: 13931 - 14956 (+)
Type: TF
Location: 13931 - 14956 (+)
Gene ID: MGYG000002148_63_14
Type: CAZyme
Location: 14953 - 16788 (+)
Type: CAZyme
Location: 14953 - 16788 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.