Cluster: MGYG000002148_CGC86
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: MGYG000002148
- CGC Family ID: CGCFAM_00045
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002148_57 | MGYG000002148_57_11 | 9606 | 11348 | - | CBM34 | GH13_20 |
| TC | MGYG000002148_57 | MGYG000002148_57_12 | 11398 | 12219 | - | 3.A.1.1.6 |
| TC | MGYG000002148_57 | MGYG000002148_57_13 | 12252 | 13151 | - | 3.A.1.1.2 |
| TC | MGYG000002148_57 | MGYG000002148_57_14 | 13201 | 14418 | - | 3.A.1.1.16 |
| pfam | MGYG000002148_57 | MGYG000002148_57_15 | 14415 | 15623 | - | CBM26 | CBM26 | CBM26 |
| pfam | MGYG000002148_57 | MGYG000002148_57_16 | 16084 | 16233 | - | FeoB_associated |
| TC | MGYG000002148_57 | MGYG000002148_57_17 | 16260 | 18437 | - | 9.A.8.1.6 |
| STP | MGYG000002148_57 | MGYG000002148_57_18 | 18521 | 18742 | - | FeoA |
| STP | MGYG000002148_57 | MGYG000002148_57_19 | 18754 | 18966 | - | FeoA |
| TC | MGYG000002148_57 | MGYG000002148_57_20 | 19144 | 21153 | - | 3.A.1.121.3 |
Gene ID: MGYG000002148_57_11
Type: CAZyme
Location: 9606 - 11348 (-)
Type: CAZyme
Location: 9606 - 11348 (-)
Gene ID: MGYG000002148_57_12
Type: TC
Location: 11398 - 12219 (-)
Type: TC
Location: 11398 - 12219 (-)
Gene ID: MGYG000002148_57_13
Type: TC
Location: 12252 - 13151 (-)
Type: TC
Location: 12252 - 13151 (-)
Gene ID: MGYG000002148_57_14
Type: TC
Location: 13201 - 14418 (-)
Type: TC
Location: 13201 - 14418 (-)
Gene ID: MGYG000002148_57_15
Type: pfam
Location: 14415 - 15623 (-)
Type: pfam
Location: 14415 - 15623 (-)
Gene ID: MGYG000002148_57_16
Type: pfam
Location: 16084 - 16233 (-)
Type: pfam
Location: 16084 - 16233 (-)
Gene ID: MGYG000002148_57_17
Type: TC
Location: 16260 - 18437 (-)
Type: TC
Location: 16260 - 18437 (-)
Gene ID: MGYG000002148_57_18
Type: STP
Location: 18521 - 18742 (-)
Type: STP
Location: 18521 - 18742 (-)
Gene ID: MGYG000002148_57_19
Type: STP
Location: 18754 - 18966 (-)
Type: STP
Location: 18754 - 18966 (-)
Gene ID: MGYG000002148_57_20
Type: TC
Location: 19144 - 21153 (-)
Type: TC
Location: 19144 - 21153 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.